RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TMEM232C9JQI7 657 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 HNRNPDLO14979 420 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 RANBP6O60518 1105 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 MBD4O95243 580 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 IPO7O95373 1038 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF18P17022 549 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 SCP2P22307 547 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 GABRB3P28472 473 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ADORA2AP29274 412 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 LRPAP1P30533 357 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 IGHMBP2P38935 993 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 TECP42680 631 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 THBS3P49746 956 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 NANOS2P60321 138 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 GNG11P61952 73 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CKAP4Q07065 602 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 STIM1Q13586 685 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 SIM2Q14190 667 aaPredicted RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 WHAMMP3Q1A5X7 153 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 LEXMQ3ZCV2 418 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CCDC152Q4G0S7 254 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 PLA1AQ53H76 456 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 DPY19L3Q6ZPD9 716 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CAND1Q86VP6 1230 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 IQCA1Q86XH1 822 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF280BQ86YH2 543 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 YAF2Q8IY57 180 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ABRAQ8N0Z2 381 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 PDILTQ8N807 584 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 SPATA5Q8NB90 893 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CCDC148Q8NFR7 591 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ADAMTS18Q8TE60 1221 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CCDC12Q8WUD4 166 aaPredicted RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 CCDC47Q96A33 483 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 RPGRIP1Q96KN7 1286 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 UTP14AQ9BVJ6 771 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 PUS3Q9BZE2 481 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 SAGE1Q9NXZ1 904 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 TFCP2L1Q9NZI6 479 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 DNMT3BQ9UBC3 853 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF212Q9UDV6 495 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 FBXO2Q9UK22 296 aaPredicted RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 MAN1B1Q9UKM7 699 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 MAN2B2Q9Y2E5 1009 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 PDS5AQ29RF7 1337 aaKnown RBP5.39□□□□□ -1.55
LINC00458-202ENST00000427299 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CTAGE9A4FU28 777 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 BTBD19C9JJ37 291 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 AP4M1O00189 453 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 POLR2DO15514 142 aaKnown RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 VNN1O95497 513 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 IVLP07476 585 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 MYL4P12829 197 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 ATP1A3P13637 1013 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 ACVR2AP27037 513 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CALML3P27482 149 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 KIF5BP33176 963 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 DGKEP52429 567 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 GHRHRQ02643 423 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SLC20A2Q08357 652 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 ARHGEF7Q14155 803 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SLC29A2Q14542 456 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 LY6KQ17RY6 165 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 HSP90B2PQ58FF3 399 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SPATA1Q5VX52 437 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 PLAG1Q6DJT9 500 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TRIM65Q6PJ69 517 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CYP26C1Q6V0L0 522 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 LEKR1Q6ZMV7 388 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 C9orf47Q6ZRZ4 202 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 KIAA0408Q6ZU52 694 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CYB5R4Q7L1T6 521 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TMTC1Q8IUR5 882 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TMEM139Q8IV31 216 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 FAM114A1Q8IWE2 563 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SYTL1Q8IYJ3 562 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 IZUMO1Q8IYV9 350 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TC2NQ8N9U0 490 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CTCFLQ8NI51 663 aaPredicted RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SPATA20Q8TB22 786 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 NOC3LQ8WTT2 800 aaKnown RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 IPCEF1Q8WWN9 437 aaPredicted RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 ZNF566Q969W8 418 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SIGLEC11Q96RL6 698 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 PRR25Q96S07 402 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 DPCDQ9BVM2 203 aaPredicted RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 CARD6Q9BX69 1037 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 HSD3B7Q9H2F3 369 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 PSD3Q9NYI0 1048 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 TRMT112Q9UI30 125 aaKnown RBP5.38□□□□□ -1.55
LINC00458-202ENST00000427299 ITGB1BP2Q9UKP3 347 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 SLIT2O94813 1529 aa5.38□□□□□ -1.55
LINC00458-202ENST00000427299 LRRC37AA6NMS7 1700 aa5.37□□□□□ -1.55
LINC00458-202ENST00000427299 QSER1Q2KHR3 1735 aa5.37□□□□□ -1.55
LINC00458-202ENST00000427299 A0A0G2JLW4 131 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms