RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CXorf40AQ8TE69 158 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TBATAQ96M53 351 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CCNL2Q96S94 520 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 NPY6RQ99463 290 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZDHHC6Q9H6R6 413 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MPP6Q9NZW5 540 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 AKAP7Q9P0M2 348 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 APOBEC3BQ9UH17 382 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PADI4Q9UM07 663 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PCDHB11Q9Y5F2 797 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 KNTC1P50748 2209 aa12.49□□□□□ -0.41
HLA-DQB3-203ENST00000425319 APC2O95996 2303 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 A0A0D9SEW6 157 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 POM121BA6NF01 834 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 IGLON5A6NGN9 336 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 K7ENP7 123 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 BIN1O00499 593 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MUSKO15146 869 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SMAD6O43541 496 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC28A2O43868 658 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TM7SF2O76062 418 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DESP17661 470 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC9A1P19634 815 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CCNHP51946 323 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GNA12Q03113 381 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ALFQ53S48 1182 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZNF805Q5CZA5 627 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PRRT3Q5FWE3 981 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FAM102AQ5T9C2 384 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 RWDD4Q6NW29 188 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 INO80CQ6PI98 192 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OLFML1Q6UWY5 402 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 USP53Q70EK8 1073 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 WDTC1Q8N5D0 677 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OR52K2Q8NGK3 314 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SNRNP27Q8WVK2 155 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SHC3Q92529 594 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PSMB7Q99436 277 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C1QTNF2Q9BXJ5 285 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PIGVQ9NUD9 493 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GULP1Q9UBP9 304 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DNAJC12Q9UKB3 198 aa12.48□□□□□ -0.41
HLA-DQB3-203ENST00000425319 KNL1Q8NG31 2342 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ZSCAN5CA6NGD5 496 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C16orf96A6NNT2 1141 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 KRIT1O00522 736 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ERBB2P04626 1255 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GIMD1P0DJR0 217 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MYF5P13349 255 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TGM2P21980 687 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GGCXP38435 758 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SUOXP51687 545 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MORC3Q14149 939 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LY6DQ14210 128 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GUSBP11Q6P575 273 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DRC7Q8IY82 874 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 FBXO39Q8N4B4 442 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PAF1Q8N7H5 531 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 OR7D4Q8NG98 312 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GFM1Q96RP9 751 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MAGEH1Q9H213 219 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ACP6Q9NPH0 428 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 DONSONQ9NYP3 566 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PPARGC1AQ9UBK2 798 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM131Q92545 1883 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MUC22E2RYF6 1773 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 IGLV3-10A0A075B6K4 115 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PES1O00541 588 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 WISP1O95388 367 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ITGA2BP08514 1039 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 JMJD7P0C870 316 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 EIF4A3P38919 411 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MAPKAPK2P49137 400 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 PEX5P50542 639 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GRM3Q14832 879 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 MYLK3Q32MK0 819 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GJB7Q6PEY0 223 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 GDPD4Q6W3E5 623 aa12.46□□□□□ -0.41
HLA-DQB3-203ENST00000425319 SLC22A18ASQ8N1D0 253 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms