RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 INSM1Q01101 510 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 FGL2Q14314 439 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 POLD3Q15054 466 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 FAM72AQ5TYM5 149 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 FAM72DQ6L9T8 149 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 Q6ZSR6 202 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 PHLDB2Q86SQ0 1253 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 FAM72BQ86X60 149 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 C3orf20Q8ND61 904 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 OR2AP1Q8NGE2 309 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 FAM172AQ8WUF8 416 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 ASB12Q8WXK4 309 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 BMFQ96LC9 184 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 LENG8Q96PV6 779 aaPredicted RBP17.66■□□□□ 0.42
MSH6-203ENST00000420813 OSBPL1AQ9BXW6 950 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 UCKL1Q9NWZ5 548 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 ADAM22Q9P0K1 906 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 CLCA2Q9UQC9 943 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 ACTL7AQ9Y615 435 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 SHROOM3Q8TF72 1996 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 LOC400499M0QZD8 3231 aa17.66■□□□□ 0.42
MSH6-203ENST00000420813 NEMP2A6NFY4 417 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 GJB6O95452 261 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 PAK4O96013 591 aaPredicted RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 CALB1P05937 261 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 GIMD1P0DJR0 217 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 GPD1P21695 349 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 RFC1P35251 1148 aaPredicted RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 COPB1P53618 953 aaKnown RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 HNRNPKP61978 463 aaKnown RBP eCLIP17.65■□□□□ 0.42
MSH6-203ENST00000420813 SNRPD1P62314 119 aaKnown RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 SYCP1Q15431 976 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 CLEC16AQ2KHT3 1053 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 ZNF805Q5CZA5 627 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 PTAR1Q7Z6K3 402 aaPredicted RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 CCDC185Q8N715 623 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 DCBLD1Q8N8Z6 715 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 DENND6BQ8NEG7 585 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 ARHGEF26Q96DR7 871 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 PCDHB18PQ96TA0 734 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 SELENOOQ9BVL4 669 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 C1QTNF2Q9BXJ5 285 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 NLGN3Q9NZ94 848 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 LIMA1Q9UHB6 759 aaKnown RBP17.65■□□□□ 0.42
MSH6-203ENST00000420813 LRRK1Q38SD2 2015 aa17.65■□□□□ 0.42
MSH6-203ENST00000420813 PTPRQQ9UMZ3 2332 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 SPTY2D1-AS1A0A0U1RR47 76 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 POM121BA6NF01 834 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 C16orf96A6NNT2 1141 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 LGALS16A8MUM7 142 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 SCAMP1O15126 338 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 FFAR2O15552 330 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 KDELR3O43731 214 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 POP4O95707 220 aaKnown RBP17.64■□□□□ 0.41
MSH6-203ENST00000420813 CKMT1AP12532 417 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 ABL2P42684 1182 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 RABIFP47224 123 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 SGCGQ13326 291 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 COL9A2Q14055 689 aaPredicted RBP17.64■□□□□ 0.41
MSH6-203ENST00000420813 WDR59Q6PJI9 974 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 RYBPQ8N488 228 aaPredicted RBP17.64■□□□□ 0.41
MSH6-203ENST00000420813 FAM181AQ8N9Y4 354 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 NEK11Q8NG66 645 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 CASKIN2Q8WXE0 1202 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
MSH6-203ENST00000420813 DUSP23Q9BVJ7 150 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 USP29Q9HBJ7 922 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 EVA1BQ9NVM1 165 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 DNAJC28Q9NX36 388 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 AK5Q9Y6K8 562 aa17.64■□□□□ 0.41
MSH6-203ENST00000420813 ANKRD36A6QL64 1941 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 SIGLEC16A6NMB1 481 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 H3BM21 787 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 KRIT1O00522 736 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 FPGTO14772 594 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 RAD51BO15315 384 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 CSF2P04141 144 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 GP1BAP07359 652 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 NME1P15531 152 aaKnown RBP17.63■□□□□ 0.41
MSH6-203ENST00000420813 ABCG1P45844 678 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 AIF1P55008 147 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 MYL5Q02045 173 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 C1QBPQ07021 282 aaKnown RBP17.63■□□□□ 0.41
MSH6-203ENST00000420813 FZD2Q14332 565 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 MYLK3Q32MK0 819 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 EFHC2Q5JST6 749 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 MON1BQ7L1V2 547 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 SLFN11Q7Z7L1 901 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 PARGQ86W56 976 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 RTL3Q8N8U3 475 aaKnown RBP17.63■□□□□ 0.41
MSH6-203ENST00000420813 OR6K2Q8NGY2 324 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 VOPP1Q96AW1 172 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
MSH6-203ENST00000420813 ERGIC2Q96RQ1 377 aa17.63■□□□□ 0.41
MSH6-203ENST00000420813 MAGEB5Q9BZ81 275 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms