RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 UVRAGQ9P2Y5 699 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 ANKRD6Q9Y2G4 727 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 CABIN1Q9Y6J0 2220 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 PCNX2A6NKB5 2137 aa20.65■□□□□ 0.9
GTF3A-202ENST00000419181 ARHGAP42A6NI28 874 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 H3BRJ5 948 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 WNT9AO14904 365 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 GIPC1O14908 333 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 VILLO15195 856 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 PRAMEF11O60813 436 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 H2AFZP0C0S5 128 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 CEACAM1P13688 526 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 GKP32189 559 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 NUDT1P36639 197 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 PAPOLAP51003 745 aaKnown RBP20.64■□□□□ 0.89
GTF3A-202ENST00000419181 NEK3P51956 506 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 ATXN7L2Q5T6C5 722 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-202ENST00000419181 NEK5Q6P3R8 708 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 H2AFVQ71UI9 128 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 POLNQ7Z5Q5 900 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 RYBPQ8N488 228 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-202ENST00000419181 HSPH1Q92598 858 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 SERAC1Q96JX3 654 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 GDAP1L1Q96MZ0 367 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 NHEJ1Q9H9Q4 299 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-202ENST00000419181 IL21RQ9HBE5 538 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 FNDC3AQ9Y2H6 1198 aaKnown RBP20.64■□□□□ 0.89
GTF3A-202ENST00000419181 SNX11Q9Y5W9 270 aa20.64■□□□□ 0.89
GTF3A-202ENST00000419181 AKR1B15C9JRZ8 316 aaPredicted RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 J3KR12 359 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 KRIT1O00522 736 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 POP4O95707 220 aaKnown RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 WNT1P04628 370 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 TMEM253P0C7T8 217 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 ZNF883P0CG24 379 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 ADRB3P13945 408 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 MAT2AP31153 395 aaKnown RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 ARL4AP40617 200 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 CTSKP43235 329 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 RHOAP61586 193 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 MYLK3Q32MK0 819 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 NAPEPLDQ6IQ20 393 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 PARS2Q7L3T8 475 aaKnown RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 ADAT2Q7Z6V5 191 aaKnown RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 PRPF39Q86UA1 669 aaKnown RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 NETO2Q8NC67 525 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 DEFB124Q8NES8 71 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 CCDC42Q96M95 316 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 CSPG4P5Q96PW8 444 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 AASDHPPTQ9NRN7 309 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 LHX3Q9UBR4 397 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 UBA2Q9UBT2 640 aaPredicted RBP20.63■□□□□ 0.89
GTF3A-202ENST00000419181 DMTF1Q9Y222 760 aa20.63■□□□□ 0.89
GTF3A-202ENST00000419181 A0A1W2PR77 199 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 RNGTTO60942 597 aaKnown RBP20.62■□□□□ 0.89
GTF3A-202ENST00000419181 PROSCO94903 275 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 IGSF6O95976 241 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 CD38P28907 300 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 CYTH1Q15438 398 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 SETMARQ53H47 684 aaPredicted RBP20.62■□□□□ 0.89
GTF3A-202ENST00000419181 ZNF805Q5CZA5 627 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 N4BP2L1Q5TBK1 243 aaPredicted RBP20.62■□□□□ 0.89
GTF3A-202ENST00000419181 FBXL19Q6PCT2 694 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 HORMAD1Q86X24 394 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 LZTR1Q8N653 840 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 TSC1Q92574 1164 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 OSBPL1AQ9BXW6 950 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 RBSNQ9H1K0 784 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 SLC32A1Q9H598 525 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 PCDH18Q9HCL0 1135 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 SPTLC3Q9NUV7 552 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 MFHAS1Q9Y4C4 1052 aa20.62■□□□□ 0.89
GTF3A-202ENST00000419181 TRPM6Q9BX84 2022 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 A0A1W2PQU0 124 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 C16orf96A6NNT2 1141 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 UGT2B4P06133 528 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 AMPD1P23109 780 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 C21orf59P57076 290 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 CPNE8Q86YQ8 564 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 FAM71BQ8TC56 605 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 SKA1Q96BD8 255 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 TM7SF3Q9NS93 570 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 ETNK2Q9NVF9 386 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 LCMT1Q9UIC8 334 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 FADS3Q9Y5Q0 445 aa20.61■□□□□ 0.89
GTF3A-202ENST00000419181 DFFAO00273 331 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 AP1G1O43747 822 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 RAD51Q06609 339 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 HADHQ16836 314 aaKnown RBP20.6■□□□□ 0.89
GTF3A-202ENST00000419181 ZNF423Q2M1K9 1284 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 ZNF284Q2VY69 593 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 TMEM259Q4ZIN3 620 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 TMCO3Q6UWJ1 677 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 GDPD4Q6W3E5 623 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 ARHGAP36Q6ZRI8 547 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 TP53INP2Q8IXH6 220 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 TC2NQ8N9U0 490 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 EXOC2Q96KP1 924 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 KLHL32Q96NJ5 620 aa20.6■□□□□ 0.89
GTF3A-202ENST00000419181 RCOR3Q9P2K3 495 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms