RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SPATA3Q8NHX4 192 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 RFFLQ8WZ73 363 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 IRGQQ8WZA9 623 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 MAML1Q92585 1016 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ZNF653Q96CK0 615 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 INTS4Q96HW7 963 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 MPP4Q96JB8 637 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ZMAT2Q96NC0 199 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 FDXACB1Q9BRP7 624 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 EIF2AQ9BY44 585 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ADNPQ9H2P0 1102 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ASCL3Q9NQ33 180 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 AASDHPPTQ9NRN7 309 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ZBTB40Q9NUA8 1239 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 SEPT10Q9P0V9 454 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 RABL2AQ9UBK7 228 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 HOOK1Q9UJC3 728 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 DSEQ9UL01 958 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 CARD8Q9Y2G2 431 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 NFE2L3Q9Y4A8 694 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 SPEF1Q9Y4P9 236 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 ASB3Q9Y575 518 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 PCDHB1Q9Y5F3 818 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 TAF6LQ9Y6J9 622 aa5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 NUP210Q8TEM1 1887 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-206ENST00000417628 MYO16Q9Y6X6 1858 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1B0GVT2 93 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 H3BQF6 201 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 K7EQS6 105 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SGK1O00141 431 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 EIF3FO00303 357 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SCDO00767 359 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 LSM1O15116 133 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 BCAT2O15382 392 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ZSCAN12O43309 604 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SEMA7AO75326 666 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 TBCAO75347 108 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SEC24AO95486 1093 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 LDOC1O95751 146 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CPA3P15088 417 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ITGB7P26010 798 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 KIF5BP33176 963 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 GNAQP50148 359 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CCNG1P51959 295 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PHC1P78364 1004 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 MRPS25P82663 173 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 MRPS35P82673 323 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CHRNEQ04844 493 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PPIDQ08752 370 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 KIF5AQ12840 1032 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 KLF1Q13351 362 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ILKQ13418 452 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 STIM1Q13586 685 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SPIDRQ14159 915 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PDGFRLQ15198 375 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 TBR1Q16650 682 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ZXDCQ2QGD7 858 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC40Q4G0X9 1142 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 FIGNQ5HY92 759 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC8B1Q6J4K2 584 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ABHD15Q6UXT9 468 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SPNS3Q6ZMD2 512 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 NCCRP1Q6ZVX7 275 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 BZW1Q7L1Q6 419 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 TRMT1LQ7Z2T5 733 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 MAATS1Q7Z4T9 603 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ZBTB46Q86UZ6 589 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 DTX1Q86Y01 620 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CCAR2Q8N163 923 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ENAHQ8N8S7 591 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SYT2Q8N9I0 419 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 IL17RCQ8NAC3 791 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PDZD8Q8NEN9 1154 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 NUP43Q8NFH3 380 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 GABPB2Q8TAK5 448 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 IFT81Q8WYA0 676 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 GOLGA1Q92805 767 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 FUBP3Q96I24 572 aaKnown RBP eCLIP5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 C8orf76Q96K31 380 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 FAM167AQ96KS9 214 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 C8orf48Q96LL4 319 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 PAAF1Q9BRP4 392 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC39A3Q9BRY0 314 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CAPS2Q9BXY5 557 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 CDH19Q9H159 772 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 DCTPP1Q9H773 170 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ZMAT4Q9H898 229 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 POLR1BQ9H9Y6 1135 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 ECHDC1Q9NTX5 307 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 TBCCD1Q9NVR7 557 aa5.71□□□□□ -1.5
ECHDC1-206ENST00000417628 NDUFA13Q9P0J0 144 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms