RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 NAA30Q147X3 362 aaPredicted RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 GRM3Q14832 879 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 BRD3Q15059 726 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 PON2Q15165 354 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 DLG2Q15700 870 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 PCSK7Q16549 785 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 KCTD19Q17RG1 926 aaPredicted RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 CARD16Q5EG05 197 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 SYCP2LQ5T4T6 812 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 CFAP58Q5T655 872 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 RNASEH2BQ5TBB1 312 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 SDE2Q6IQ49 451 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 HIBCHQ6NVY1 386 aaPredicted RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 SERPINA13PQ6UXR4 307 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 TPRG1Q6ZUI0 275 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 SRLQ86TD4 932 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 LINC00523Q86TU6 105 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 CNTD1Q8N815 330 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 PDCD7Q8N8D1 485 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 EIF1ADQ8N9N8 165 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 TSEN2Q8NCE0 465 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.05
RBM39-208ENST00000416108 SEC14L1Q92503 715 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 CPT1BQ92523 772 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 ART4Q93070 314 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 ISG20Q96AZ6 181 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 CHFRQ96EP1 664 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 IMP4Q96G21 291 aaKnown RBP8.52□□□□□ -1.05
RBM39-208ENST00000416108 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.05
RBM39-208ENST00000416108 FMO2Q99518 471 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 FICDQ9BVA6 458 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 PARD6BQ9BYG5 372 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 SLC2A4RGQ9NR83 387 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 UBP1Q9NZI7 540 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 LHX3Q9UBR4 397 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 FBXL21Q9UKT6 434 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 NFU1Q9UMS0 254 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 DUSP12Q9UNI6 340 aa8.52□□□□□ -1.05
RBM39-208ENST00000416108 GOLGA8MH3BSY2 632 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 K7ERQ8 282 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 INSIG1O15503 277 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 ATP9BO43861 1147 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 AP2A1O95782 977 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 MT-CO1P00395 513 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 IVDP26440 423 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 SERPINA4P29622 427 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 TNFRSF4P43489 277 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 CSNK1DP48730 415 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 MLF2Q15773 248 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 SLC14A2Q15849 920 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 HIF1AQ16665 826 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 SLC44A4Q53GD3 710 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 DNAJC21Q5F1R6 531 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 ATXN7L2Q5T6C5 722 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 TMEM215Q68D42 235 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 CCNI2Q6ZMN8 369 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 CENPUQ71F23 418 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 TRMT11Q7Z4G4 463 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 CCDC25Q86WR0 208 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 PDIK1LQ8N165 341 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 NDUFAF2Q8N183 169 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 PHTF2Q8N3S3 785 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 PGBD5Q8N414 524 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 ZNF513Q8N8E2 541 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 DNAAF3Q8N9W5 541 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 KDM1BQ8NB78 822 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 MCUQ8NE86 351 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 SPATA22Q8NHS9 363 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 FBXO25Q8TCJ0 367 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 PDCD6IPQ8WUM4 868 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 SORCS1Q8WY21 1168 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 FAM3CQ92520 227 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 PRCCQ92733 491 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 SHDQ96IW2 340 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 TUBGCP5Q96RT8 1024 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 TBL1YQ9BQ87 522 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 TNKS2Q9H2K2 1166 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 ZDHHC6Q9H6R6 413 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 ATP13A3Q9H7F0 1226 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 XAB2Q9HCS7 855 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 GRHL1Q9NZI5 618 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 HECAQ9UBI9 543 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 SUN2Q9UH99 717 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 EVLQ9UI08 416 aaPredicted RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 RAB21Q9UL25 225 aa8.51□□□□□ -1.05
RBM39-208ENST00000416108 MRPS17Q9Y2R5 130 aaKnown RBP8.51□□□□□ -1.05
RBM39-208ENST00000416108 F5P12259 2224 aa8.5□□□□□ -1.05
RBM39-208ENST00000416108 EDDM13A0A1B0GTR0 161 aa8.5□□□□□ -1.05
RBM39-208ENST00000416108 A0A1W2PQ67 120 aa8.5□□□□□ -1.05
RBM39-208ENST00000416108 CCDC151A5D8V7 595 aa8.5□□□□□ -1.05
RBM39-208ENST00000416108 TTC34A8MYJ7 566 aa8.5□□□□□ -1.05
RBM39-208ENST00000416108 PRRT4C9JH25 899 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms