RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PCID2Q5JVF3 399 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 FAM72AQ5TYM5 149 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 FAM72DQ6L9T8 149 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 CLEC20AQ6ZU45 233 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 PAQR9Q6ZVX9 377 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 FAM72BQ86X60 149 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 BHLHE22Q8NFJ8 381 aaPredicted RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 ZSCAN18Q8TBC5 510 aaPredicted RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 DDI1Q8WTU0 396 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 DPF3Q92784 378 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 TOP1MTQ969P6 601 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 MAELQ96JY0 434 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 KATNBL1Q9H079 304 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 NXF3Q9H4D5 531 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 CNGB3Q9NQW8 809 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
CD44-206ENST00000415148 ACOT9Q9Y305 439 aa9.93□□□□□ -0.82
CD44-206ENST00000415148 SYNJ2BP-COX16A0A087WUM0 186 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 PRSS51A0A1B0GVH4 220 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 C7orf72A4D263 438 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 GABRDO14764 452 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 TRPA1O75762 1119 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 RNASEH2AO75792 299 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 BEST1O76090 585 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 PENKP01210 267 aaPredicted RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 MMP3P08254 477 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 FAM200BP0CF97 657 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 SLC35E2BP0CK96 405 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 NFKB1P19838 968 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 AKAP5P24588 427 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 NMBRP28336 390 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 LRPAP1P30533 357 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 ADCYAP1R1P41586 468 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 NDUFV1P49821 464 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 KPNA2P52292 529 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 NAGLUP54802 743 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 EMP3P54852 163 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 DAOAP59103 153 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 DNAJB13P59910 316 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 HPCAP84074 193 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 LRRC8EQ6NSJ5 796 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 OSTM1Q86WC4 334 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 LSMEM2Q8N112 164 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 FSTL5Q8N475 847 aaPredicted RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 SNX31Q8N9S9 440 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 FAM110BQ8TC76 370 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 CATSPER2Q96P56 530 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 PPP1R2P1Q96PQ5 205 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 APBA2Q99767 749 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 WDR41Q9HAD4 459 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 PTTG2Q9NZH5 202 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 COX16Q9P0S2 106 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 A0A0J9YVX5 310 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 TMEM233B4DJY2 109 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 TK2O00142 265 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 TRIM38O00635 465 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 ACOT8O14734 319 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 AHSGP02765 367 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 ENO3P13929 434 aaPredicted RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 GALK1P51570 392 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 RAB10P61026 200 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 ZBTB17Q13105 803 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 APOFQ13790 326 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 DUSP28Q4G0W2 176 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 RAB41Q5JT25 222 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 DUS1LQ6P1R4 473 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 PKN3Q6P5Z2 889 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 BORAQ6PGQ7 559 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 B3GNT6Q6ZMB0 384 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 CEP70Q8NHQ1 597 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 FAR2Q96K12 515 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 SCYL1Q96KG9 808 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 NPAS2Q99743 824 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 NUF2Q9BZD4 464 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 SEMA6AQ9H2E6 1030 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 GMPR2Q9P2T1 348 aaKnown RBP9.92□□□□□ -0.82
CD44-206ENST00000415148 EPS15L1Q9UBC2 864 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 TMCO1Q9UM00 188 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 RNF11Q9Y3C5 154 aa9.92□□□□□ -0.82
CD44-206ENST00000415148 FNDC1Q4ZHG4 1894 aaPredicted RBP9.91□□□□□ -0.82
CD44-206ENST00000415148 A0A087X1B8 175 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 PLOD2O00469 737 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 NRP1O14786 923 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 DLX3O60479 287 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 FGFR3P22607 806 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 CCNCP24863 283 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 MAPRE2Q15555 327 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 NRF1Q16656 503 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 PM20D1Q6GTS8 502 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 DCLRE1AQ6PJP8 1040 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 PIWIL4Q7Z3Z4 852 aaKnown RBP9.91□□□□□ -0.82
CD44-206ENST00000415148 SPATA6LQ8N4H0 392 aa9.91□□□□□ -0.82
CD44-206ENST00000415148 NPWQ8N729 165 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms