RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 EIF2B4Q9UI10 523 aaKnown RBP14.94□□□□□ -0.02
CHD1-202ENST00000414220 MFHAS1Q9Y4C4 1052 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 WASF2Q9Y6W5 498 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 SPAG17Q6Q759 2223 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 PLXND1Q9Y4D7 1925 aa14.94□□□□□ -0.02
CHD1-202ENST00000414220 FAM186AA6NE01 2351 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 RIF1Q5UIP0 2472 aaKnown RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 ABCA7Q8IZY2 2146 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 LRRD1A4D1F6 860 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ZNF487B1APH4 448 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 CTSLP07711 333 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 TNNT1P13805 278 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 COMTP21964 271 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 XPAP23025 273 aaPredicted RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 KDELR1P24390 212 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 DRD3P35462 400 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ID4P47928 161 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 AFF3P51826 1226 aaKnown RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 LIMK1P53667 647 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 KIF5AQ12840 1032 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ZNF235Q14590 738 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 PUM1Q14671 1186 aaKnown RBP eCLIP14.93□□□□□ -0.029e-8■■□□□ 13
CHD1-202ENST00000414220 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ZNF805Q5CZA5 627 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 TIGD7Q6NT04 549 aaPredicted RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 IL27RAQ6UWB1 636 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 GDPD4Q6W3E5 623 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ARHGAP12Q8IWW6 846 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ZCCHC9Q8N567 271 aaKnown RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 TSC1Q92574 1164 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 RTKNQ9BST9 563 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 CPEB1Q9BZB8 566 aaKnown RBP14.93□□□□□ -0.02
CHD1-202ENST00000414220 KLC2Q9H0B6 622 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 SMOC1Q9H4F8 434 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 TMEM9BQ9NQ34 198 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 ACTL7AQ9Y615 435 aa14.93□□□□□ -0.02
CHD1-202ENST00000414220 OTOGLQ3ZCN5 2332 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 A0A1W2PPC4 97 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 PATE3B3GLJ2 98 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 NEMP1O14524 444 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 MAGEC1O60732 1142 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 PCDH8O95206 1070 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 KRT1P04264 644 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 UGT2B4P06133 528 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 CD48P09326 243 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 IL4RP24394 825 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 CSNK1DP48730 415 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 ARSEP51690 589 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 VAV2P52735 878 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 IRX4P78413 519 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 NSUN2Q08J23 767 aaKnown RBP eCLIP14.92□□□□□ -0.02
CHD1-202ENST00000414220 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 LBRQ14739 615 aaKnown RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 PAFAH1B3Q15102 231 aaKnown RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 CYTH1Q15438 398 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 RSPO4Q2I0M5 234 aaPredicted RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 SETMARQ53H47 684 aaPredicted RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 AGBL4Q5VU57 503 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 TCEAL6Q6IPX3 200 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 BZW1Q7L1Q6 419 aaKnown RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 DAAM2Q86T65 1068 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 NPWQ8N729 165 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 CCDC112Q8NEF3 446 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 HCAR2Q8TDS4 363 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 ANP32BQ92688 251 aaKnown RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 TCEAL3Q969E4 200 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 FAM131CQ96AQ9 280 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 FEM1CQ96JP0 617 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 TUBGCP5Q96RT8 1024 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 PDFQ9HBH1 243 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 DMTF1Q9Y222 760 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 ALG6Q9Y672 507 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 GPR179Q6PRD1 2367 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 EP300Q09472 2414 aaPredicted RBP14.92□□□□□ -0.02
CHD1-202ENST00000414220 SDK1Q7Z5N4 2213 aa14.92□□□□□ -0.02
CHD1-202ENST00000414220 LNP1A1A4G5 178 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 BTNL10A8MVZ5 291 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 ARHGAP33O14559 1287 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 BUB1BO60566 1050 aaPredicted RBP14.91□□□□□ -0.02
CHD1-202ENST00000414220 RNGTTO60942 597 aaKnown RBP14.91□□□□□ -0.02
CHD1-202ENST00000414220 ENGP17813 658 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 NFKBIAP25963 317 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 SERPINA4P29622 427 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 CETN2P41208 172 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 SUOXP51687 545 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 C21orf59P57076 290 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 RACK1P63244 317 aaKnown RBP14.91□□□□□ -0.02
CHD1-202ENST00000414220 TFDP2Q14188 446 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 STPG1Q5TH74 334 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 MARC1Q5VT66 337 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 C11orf63Q6NUN7 778 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 RAD9BQ6WBX8 426 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 TTC7BQ86TV6 843 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 TRIM69Q86WT6 500 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 OR6K2Q8NGY2 324 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 ARRDC3Q96B67 414 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms