RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CDONQ4KMG0 1287 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 HERC4Q5GLZ8 1057 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 BMP2KLQ5H9B9 411 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FAM76BQ5HYJ3 339 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 AARS2Q5JTZ9 985 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MPP7Q5T2T1 576 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RIPPLY2Q5TAB7 128 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FAXCQ5TGI0 409 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 KLHDC7AQ5VTJ3 777 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GARNL3Q5VVW2 1013 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 AFMIDQ63HM1 303 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CAVIN1Q6NZI2 390 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 USP17L6PQ6QN14 398 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 NPNTQ6UXI9 565 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SLC30A10Q6XR72 485 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF852Q6ZMS4 543 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 C3orf62Q6ZUJ4 267 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 UBE2R2Q712K3 238 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 OTOAQ7RTW8 1153 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 KRT27Q7Z3Y8 459 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GPR149Q86SP6 731 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TTC7BQ86TV6 843 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF677Q86XU0 584 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RIOX2Q8IUF8 465 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CNTN4Q8IWV2 1026 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 REXO1L1PQ8IX06 675 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF679Q8IYX0 411 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TAGAPQ8N103 731 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ADSSL1Q8N142 457 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CSGALNACT2Q8N6G5 542 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PLD5Q8N7P1 536 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CCNYL1Q8N7R7 359 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RNF152Q8N8N0 203 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SCAIQ8N9R8 606 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TDRD5Q8NAT2 981 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CLRN3Q8NCR9 226 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 BBS1Q8NFJ9 593 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 STT3BQ8TCJ2 826 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DNAJA4Q8WW22 397 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 LIPHQ8WWY8 451 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EXT2Q93063 718 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 NT5C3BQ969T7 300 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RILPL2Q969X0 211 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RHBDF1Q96CC6 855 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GRAMD1AQ96CP6 724 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SPDL1Q96EA4 605 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PGM2Q96G03 612 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 METTL2AQ96IZ6 378 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RAB3IPQ96QF0 476 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 KCNK16Q96T55 309 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 UHRF1Q96T88 793 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CYTH2Q99418 400 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 AGAP2Q99490 1192 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PLIN2Q99541 437 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TM9SF2Q99805 663 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MCMBPQ9BTE3 642 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EDEM2Q9BV94 578 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SF3B5Q9BWJ5 86 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CELF4Q9BZC1 486 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CD244Q9BZW8 370 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SLC26A1Q9H2B4 701 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZSCAN16Q9H4T2 348 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 SLITRK6Q9H5Y7 841 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TMEM206Q9H813 350 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 EMC7Q9NPA0 242 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 OBP2BQ9NPH6 170 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 C14orf119Q9NWQ9 140 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FAM120CQ9NX05 1096 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 DDX43Q9NXZ2 648 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PKD2L2Q9NZM6 624 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 RCOR3Q9P2K3 495 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 IMPACTQ9P2X3 320 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 TNFRSF10DQ9UBN6 386 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FEM1BQ9UK73 627 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ACSL6Q9UKU0 697 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF215Q9UL58 517 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 CAPN11Q9UMQ6 739 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PCDHA7Q9UN72 937 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PLA2G2DQ9UNK4 145 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 MRPS2Q9Y399 296 aaKnown RBP3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PPIL1Q9Y3C6 166 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF451Q9Y4E5 1061 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 GPR45Q9Y5Y3 372 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 PIAS3Q9Y6X2 628 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FPGT-TNNI3KV9GXZ4 949 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 INSRP06213 1382 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 ANKRD30AQ9BXX3 1397 aa3.71□□□□□ -1.82
SF3B1-203ENST00000414174 FAM205AQ6ZU69 1335 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 IRS2Q9Y4H2 1338 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 A0A0U1RQV5 110 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 hCG_1809904A0A1W2PP81 198 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PPE2 198 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 LOC390937A0A1W2PQ73 354 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 A0A1W2PR64 198 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 MACROD2A1Z1Q3 448 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 POM121BA6NF01 834 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 FAM47DPA6NHR8 397 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 OR6C75A6NL08 312 aa3.7□□□□□ -1.82
SF3B1-203ENST00000414174 SNTNA6NMZ2 147 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms