RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 COL27A1Q8IZC6 1860 aaPredicted RBP19.56■□□□□ 0.72
CPSF7-204ENST00000413232 LY6G6EA0A0G2JKS1 128 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 SPINT1O43278 529 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 PLEKP08567 350 aaPredicted RBP19.55■□□□□ 0.72
CPSF7-204ENST00000413232 RHOQP17081 205 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 ITPKBP27987 946 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 PTPN9P43378 593 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 SEMG2Q02383 582 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
CPSF7-204ENST00000413232 STRADAQ7RTN6 431 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 PYROXD2Q8N2H3 581 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 FAM172AQ8WUF8 416 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 RFFLQ8WZ73 363 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 ISG20Q96AZ6 181 aaKnown RBP19.55■□□□□ 0.72
CPSF7-204ENST00000413232 NXPE2Q96DL1 559 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 KLF6Q99612 283 aaPredicted RBP19.55■□□□□ 0.72
CPSF7-204ENST00000413232 KLC2Q9H0B6 622 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 KLF15Q9UIH9 416 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 ITM2BQ9Y287 266 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 HS3ST3A1Q9Y663 406 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 U3KQA8 63 aa19.55■□□□□ 0.72
CPSF7-204ENST00000413232 IGLON5A6NGN9 336 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 NEBLO76041 1014 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 MAPKAPK2P49137 400 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 COPB1P53618 953 aaKnown RBP19.54■□□□□ 0.72
CPSF7-204ENST00000413232 RPS21P63220 83 aaKnown RBP19.54■□□□□ 0.72
CPSF7-204ENST00000413232 FZD2Q14332 565 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 RTP5Q14D33 572 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 SYCP1Q15431 976 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 WDR59Q6PJI9 974 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 TMC6Q7Z403 805 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 PTAR1Q7Z6K3 402 aaPredicted RBP19.54■□□□□ 0.72
CPSF7-204ENST00000413232 PLPP6Q8IY26 295 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 FEM1CQ96JP0 617 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 AK5Q9Y6K8 562 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 ANKRD36A6QL64 1941 aa19.54■□□□□ 0.72
CPSF7-204ENST00000413232 TCRBV5S1A1TA0A578 114 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 C16orf96A6NNT2 1141 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 A6NNZ2 444 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 AP1G1O43747 822 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 KRT3P12035 628 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 STAT1P42224 750 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 CLEC16AQ2KHT3 1053 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 ARL13BQ3SXY8 428 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 ATXN7L2Q5T6C5 722 aaPredicted RBP19.53■□□□□ 0.72
CPSF7-204ENST00000413232 KIAA1161Q6NSJ0 714 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 TRIM72Q6ZMU5 477 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 RYBPQ8N488 228 aaPredicted RBP19.53■□□□□ 0.72
CPSF7-204ENST00000413232 DCBLD1Q8N8Z6 715 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 TBC1D31Q96DN5 1066 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 C1QTNF2Q9BXJ5 285 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 NRSN2Q9GZP1 204 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 MAGEH1Q9H213 219 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 DNAJC28Q9NX36 388 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 ADAM22Q9P0K1 906 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 CLCA2Q9UQC9 943 aa19.53■□□□□ 0.72
CPSF7-204ENST00000413232 KRIT1O00522 736 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 UGT2B4P06133 528 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 ITIH2P19823 946 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 GSCP56915 257 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-204ENST00000413232 DAB2P98082 770 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 ZNF805Q5CZA5 627 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 LRRC73Q5JTD7 316 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 FKBP15Q5T1M5 1219 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 KYAT3Q6YP21 454 aaKnown RBP19.52■□□□□ 0.72
CPSF7-204ENST00000413232 APTXQ7Z2E3 356 aaKnown RBP19.52■□□□□ 0.72
CPSF7-204ENST00000413232 PHF13Q86YI8 300 aaPredicted RBP19.52■□□□□ 0.72
CPSF7-204ENST00000413232 OR2AP1Q8NGE2 309 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 BAP1Q92560 729 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 IFT43Q96FT9 208 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 APOLD1Q96LR9 279 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 HSD3B7Q9H2F3 369 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 PCDHB1Q9Y5F3 818 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 MGAQ8IWI9 3026 aa19.52■□□□□ 0.72
CPSF7-204ENST00000413232 SPTY2D1-AS1A0A0U1RR47 76 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 CXorf51AA0A1B0GTR3 108 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 K7ESM1 405 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 SCAMP1O15126 338 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 KDELR3O43731 214 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 RAMP2O60895 175 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 MT-CO3P00414 261 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 CKMT1AP12532 417 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 GPD1P21695 349 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 ETFBP38117 255 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 EIF2S3P41091 472 aaKnown RBP19.51■□□□□ 0.71
CPSF7-204ENST00000413232 RPL7AP62424 266 aaKnown RBP19.51■□□□□ 0.71
CPSF7-204ENST00000413232 POLD3Q15054 466 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-204ENST00000413232 MYLK3Q32MK0 819 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 MON1BQ7L1V2 547 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 CACTIN-AS1Q8N1I8 211 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 NTAN1Q96AB6 310 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 KLHL32Q96NJ5 620 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 SELENOOQ9BVL4 669 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 RETREG1Q9H6L5 497 aa19.51■□□□□ 0.71
CPSF7-204ENST00000413232 LIMA1Q9UHB6 759 aaKnown RBP19.51■□□□□ 0.71
CPSF7-204ENST00000413232 PNMA8BQ9ULN7 279 aaPredicted RBP19.51■□□□□ 0.71
CPSF7-204ENST00000413232 SIGLEC16A6NMB1 481 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 LGALS16A8MUM7 142 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 AREL1O15033 823 aa19.5■□□□□ 0.71
CPSF7-204ENST00000413232 CCP110O43303 1012 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms