RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZMAT1Q5H9K5 638 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 FGD3Q5JSP0 725 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 PERM1Q5SV97 790 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 FUT10Q6P4F1 479 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 LINC00299Q6ZSB3 139 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 C12orf40Q86WS4 652 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 METTL23Q86XA0 190 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 SMYD4Q8IYR2 804 aaPredicted RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 METTL13Q8N6R0 699 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 TTLL6Q8N841 843 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 OR52K1Q8NGK4 314 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 IFI44Q8TCB0 444 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 GDPD5Q8WTR4 605 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 JADE3Q92613 823 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ZDHHC12Q96GR4 267 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ARHGEF4Q9NR80 690 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 TAS2R1Q9NYW7 299 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ZFP69BQ9UJL9 534 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 WBP11Q9Y2W2 641 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 ACTL7AQ9Y615 435 aa5.3□□□□□ -1.56
HERC4-205ENST00000412272 RBBP6Q7Z6E9 1792 aaKnown RBP5.3□□□□□ -1.56
HERC4-205ENST00000412272 POTECB2RU33 542 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 EYA2O00167 538 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 AURKAO14965 403 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TP73O15350 636 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CTNNA2P26232 953 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 KLRC1P26715 233 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 MAP4P27816 1152 aaKnown RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 LEPRP48357 1165 aaKnown RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 NDST2P52849 883 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CASP6P55212 293 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 MPP2Q14168 576 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 MXD4Q14582 209 aaPredicted RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 RRP1BQ14684 758 aaKnown RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 MORF4L2Q15014 288 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM76BQ5HYJ3 339 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TCTE1Q5JU00 501 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM160B1Q5W0V3 765 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CASC4Q6P4E1 433 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CNNM4Q6P4Q7 775 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TMEM81Q6P7N7 255 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TRIM72Q6ZMU5 477 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 USP49Q70CQ1 688 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 LPCAT1Q8NF37 534 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 OR6F1Q8NGZ6 308 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 SEPT8Q92599 483 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 GTF2H4Q92759 462 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 P2RX5Q93086 422 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 RADILQ96JH8 1075 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 RNF170Q96K19 258 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TWNKQ96RR1 684 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CCM2Q9BSQ5 444 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 HSPBP1Q9NZL4 362 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 PCDH10Q9P2E7 1040 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ENPP5Q9UJA9 477 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 AGTPBP1Q9UPW5 1226 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 GAB2Q9UQC2 676 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 PFASO15067 1338 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 GSTTP1A0A1W2PQM5 241 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ZNF839A8K0R7 811 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TMEM127O75204 238 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 PSMA2P25787 234 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 UGT2B10P36537 528 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FNTBP49356 437 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 KLK7P49862 253 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TKTL1P51854 596 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ERVK-8P63133 956 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 PLIN5Q00G26 463 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TEKQ02763 1124 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 VAC14Q08AM6 782 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 BAMBIQ13145 260 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 MAPK7Q13164 816 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CARTPTQ16568 116 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 MAN2A1Q16706 1144 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 HES5Q5TA89 166 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 SLC9A4Q6AI14 798 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 GALNT18Q6P9A2 607 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 RHBDF2Q6PJF5 856 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 GPBP1Q86WP2 473 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TMPRSS6Q8IU80 811 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CBARPQ8N350 705 aaPredicted RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 IGDCC4Q8TDY8 1250 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 CNOT6LQ96LI5 555 aaKnown RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 GCNAQ96QF7 691 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TMEM120AQ9BXJ8 343 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.29□□□□□ -1.56
HERC4-205ENST00000412272 CCDC8Q9H0W5 538 aaPredicted RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ARL8BQ9NVJ2 186 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 NARFQ9UHQ1 456 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 TRPV2Q9Y5S1 764 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 ASTN2O75129 1339 aaPredicted RBP5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 EFCAB7A8K855 629 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM25AB3EWG3 89 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM25CB3EWG5 89 aa5.29□□□□□ -1.56
HERC4-205ENST00000412272 FAM25GB3EWG6 89 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms