RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 GLDCP23378 1020 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 BMP8BP34820 402 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PLK1P53350 603 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 NTHL1P78549 312 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 CRADDP78560 199 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 DSC2Q02487 901 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TUBB8Q3ZCM7 444 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 RNF219Q5W0B1 726 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 PPP2R2DQ66LE6 453 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 IL31Q6EBC2 164 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TMEM184AQ6ZMB5 413 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 GRASPQ7Z6J2 395 aaPredicted RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SUGP1Q8IWZ8 645 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 DCAF4L2Q8NA75 395 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 WFDC5Q8TCV5 224 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 RANBP9Q96S59 729 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 FEM1AQ9BSK4 669 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 FICDQ9BVA6 458 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SFXN1Q9H9B4 322 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SSU72Q9NP77 194 aaKnown RBP5.6□□□□□ -1.51
EPHA4-202ENST00000409854 TDP1Q9NUW8 608 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 HAUS2Q9NVX0 235 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 UBP1Q9NZI7 540 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SENP1Q9P0U3 644 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 SEPT3Q9UH03 358 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 MAD1L1Q9Y6D9 718 aa5.6□□□□□ -1.51
EPHA4-202ENST00000409854 LAMA2P24043 3122 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SRRM3A6NNA2 597 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CXorf49A8MYA2 514 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 H0Y626 953 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 PRAMEF12O95522 483 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 POLBP06746 335 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CEBPBP17676 345 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 AVPR1AP37288 418 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SLC18A1P54219 525 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 WNT3AP56704 352 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MAXP61244 160 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF235Q14590 738 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TMED2Q15363 201 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CYTH1Q15438 398 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 INO80DQ53TQ3 878 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CERCAMQ5T4B2 595 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TRMT10BQ6PF06 316 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SLC26A11Q86WA9 606 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CARNMT1Q8N4J0 409 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 IPMKQ8NFU5 416 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 FIBINQ8TAL6 211 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 GDPD5Q8WTR4 605 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CENPTQ96BT3 561 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 FEM1CQ96JP0 617 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SMG9Q9H0W8 520 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TLE6Q9H808 572 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 KIF9Q9HAQ2 790 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 PIH1D1Q9NWS0 290 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SAMD15Q9P1V8 674 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 FAM169AQ9Y6X4 670 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 DOCK8Q8NF50 2099 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 NEBLO76041 1014 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 EPOP01588 193 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 ATXN1LP0C7T5 689 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CES1P23141 567 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MZF1P28698 734 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 HPDP32754 393 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MDH1P40925 334 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CSKP41240 450 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CD86P42081 329 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MSH2P43246 934 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 NRIP1P48552 1158 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 PPARDQ03181 441 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SLC12A1Q13621 1099 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 ANKRD20A4Q4UJ75 823 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 PCID2Q5JVF3 399 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 COL13A1Q5TAT6 717 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 LRRC6Q86X45 466 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF354CQ86Y25 554 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 BBS5Q8N3I7 341 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 DNAAF3Q8N9W5 541 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 OTUB2Q96DC9 234 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MRPL38Q96DV4 380 aaKnown RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CERS2Q96G23 380 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 ZSWIM3Q96MP5 696 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TRIB3Q96RU7 358 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 FSD1LQ9BXM9 530 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MUC3BQ9H195 1237 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 CERS4Q9HA82 394 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 MARK1Q9P0L2 795 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 LHX3Q9UBR4 397 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TBK1Q9UHD2 729 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 TCAF1Q9Y4C2 921 aa5.59□□□□□ -1.51
EPHA4-202ENST00000409854 SCAMP3O14828 347 aaKnown RBP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PRPF4O43172 522 aaKnown RBP eCLIP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 PMPCBO75439 489 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MAGEA8P43361 318 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 ATP1A2P50993 1020 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 NSUN2Q08J23 767 aaKnown RBP eCLIP5.58□□□□□ -1.52
EPHA4-202ENST00000409854 MGAT5Q09328 741 aa5.58□□□□□ -1.52
EPHA4-202ENST00000409854 CDH18Q13634 790 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms