RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MS4A13Q5J8X5 152 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 ARTNQ5T4W7 220 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 SAMD5Q5TGI4 173 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 PIK3R6Q5UE93 754 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 SNX30Q5VWJ9 437 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 ATG16L1Q676U5 607 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 CNKSR3Q6P9H4 555 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 KLHDC10Q6PID8 442 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 ZNF683Q8IZ20 524 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 CNTD1Q8N815 330 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 CCDC63Q8NA47 563 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 SH3TC2Q8TF17 1288 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 NSMCE1Q8WV22 266 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 ISL2Q96A47 359 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 CRELD1Q96HD1 420 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 PGLYRP2Q96PD5 576 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 DEFB118Q96PH6 123 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 FAM111AQ96PZ2 611 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 SEPT5Q99719 369 aaPredicted RBP7.62□□□□□ -1.19
CXCR4-202ENST00000409817 KIFC1Q9BW19 673 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 GLOD4Q9HC38 313 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 VPS45Q9NRW7 570 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 SLC17A7Q9P2U7 560 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 DCDC2Q9UHG0 476 aa7.62□□□□□ -1.19
CXCR4-202ENST00000409817 IPO11Q9UI26 975 aaKnown RBP7.62□□□□□ -1.19
CXCR4-202ENST00000409817 FNDC3AQ9Y2H6 1198 aaKnown RBP7.62□□□□□ -1.19
CXCR4-202ENST00000409817 FNDC1Q4ZHG4 1894 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 CFAP73A6NFT4 308 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 C2CD2LO14523 706 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 TIMM44O43615 452 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 MOCS2O96007 188 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 F11P03951 625 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 ITGA2BP08514 1039 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 POLD2P49005 469 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 GPR15P49685 360 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 PGFP49763 221 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 LIG3P49916 1009 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 CDK18Q07002 472 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 EFEMP1Q12805 493 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 UBAP2LQ14157 1087 aaKnown RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 IKBKEQ14164 716 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 UGP2Q16851 508 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 PARP15Q460N3 678 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 GALNTL6Q49A17 601 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 PCID2Q5JVF3 399 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 RTP2Q5QGT7 225 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 C10orf120Q5SQS8 335 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 MROH9Q5TGP6 573 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 TPGS2Q68CL5 300 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 PDPK2PQ6A1A2 396 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 CGB2Q6NT52 195 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 SLC39A5Q6ZMH5 540 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 FAM47EQ6ZV65 393 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 LCA5Q86VQ0 697 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 RASSF3Q86WH2 238 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 RNF168Q8IYW5 571 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 NDUFAF2Q8N183 169 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 MICALL1Q8N3F8 863 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 NETO2Q8NC67 525 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 GABPB2Q8TAK5 448 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 ZNF669Q96BR6 464 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
CXCR4-202ENST00000409817 TBL1YQ9BQ87 522 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 TSSK1BQ9BXA7 367 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 RNF208Q9H0X6 261 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 NEUROD4Q9HD90 331 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 BRD7Q9NPI1 651 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 SIRPGQ9P1W8 387 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 CAPN7Q9Y6W3 813 aa7.61□□□□□ -1.19
CXCR4-202ENST00000409817 SHROOM3Q8TF72 1996 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 GREB1Q4ZG55 1949 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 ZCWPW2A0A1B0GU75 182 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 HMX2A2RU54 273 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 SLC38A8A6NNN8 435 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 ANKRD65E5RJM6 399 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 TLR5O60602 858 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 EFCAB14O75071 495 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 ATP5BP06576 529 aaKnown RBP7.6□□□□□ -1.19
CXCR4-202ENST00000409817 NEFHP12036 1026 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 CCL5P13501 91 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 PAMP19021 973 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 DNAJB1P25685 340 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 MAGEA12P43365 314 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 PPP3CCP48454 512 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 GATMP50440 423 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 PAPOLAP51003 745 aaKnown RBP7.6□□□□□ -1.19
CXCR4-202ENST00000409817 LIMK2P53671 638 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 ARPP19P56211 112 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 CRADDP78560 199 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 PDE1BQ01064 536 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 DUSP4Q13115 394 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
CXCR4-202ENST00000409817 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 C5orf22Q49AR2 442 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 SDHAF4Q5VUM1 108 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 OTOAQ7RTW8 1153 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 CCDC91Q7Z6B0 441 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 C14orf80Q86SX3 495 aa7.6□□□□□ -1.19
CXCR4-202ENST00000409817 NLRP8Q86W28 1048 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms