RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 AK5Q9Y6K8 562 aa8.5□□□□□ -1.05
SCN9A-203ENST00000409672 IRS2Q9Y4H2 1338 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PSTPIP1O43586 416 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SP2Q02086 613 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 DGCR6Q14129 220 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PGBD2Q6P3X8 592 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 GCNT7Q6ZNI0 430 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TRPM8Q7Z2W7 1104 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SCLYQ96I15 445 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 C2orf49Q9BVC5 232 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PRRG3Q9BZD7 231 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CHMP1AQ9HD42 196 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF536O15090 1300 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ZNF189O75820 626 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 RPL17P18621 184 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 NOS2P35228 1153 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 FXR2P51116 673 aaKnown RBP eCLIP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TROAPQ12815 778 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CHAF1BQ13112 559 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 NFATC2Q13469 925 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 LRRC6Q86X45 466 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 RAD54BQ9Y620 910 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 MSI1O43347 362 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 GNSP15586 552 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TEAD4Q15561 434 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 FAM91A1Q658Y4 838 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CCDC54Q8NEL0 328 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ATL1Q8WXF7 558 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 IL12RB2Q99665 862 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ERP44Q9BS26 406 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 EFCAB1Q9HAE3 211 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 NCAM2O15394 837 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 AGTP01019 485 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 FBXO48Q5FWF7 155 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CADM2Q8N3J6 435 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 OR52L1Q8NGH7 329 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CLHC1Q8NHS4 586 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 AUTS2Q8WXX7 1259 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 RPL10LQ96L21 214 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CNGB3Q9NQW8 809 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 INTS7Q9NVH2 962 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SEPT3Q9UH03 358 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 GNPTGQ9UJJ9 305 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 MORC2Q9Y6X9 1032 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 S100A3P33764 101 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PBX3P40426 434 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PTPN5P54829 565 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 IRF8Q02556 426 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 LPAL2Q16609 132 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 PAGE2BQ5JRK9 111 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 FNBP1LQ5T0N5 605 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 N4BP2L1Q5TBK1 243 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 GPR141Q7Z602 305 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SGMS1Q86VZ5 419 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 SLC9A6Q92581 669 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 FAM227AF5H4B4 570 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TNFSF9P41273 254 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 AADACL2Q6P093 401 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 CHST15Q7LFX5 561 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 EPB41L4BQ9H329 900 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TBC1D23Q9NUY8 699 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ARHGAP28Q9P2N2 729 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 OR12D3Q9UGF7 316 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 MRPS35P82673 323 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 RAVER1Q8IY67 606 aaKnown RBP8.49□□□□□ -1.05
SCN9A-203ENST00000409672 ARMC5Q96C12 935 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 MTMR9Q96QG7 549 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 TUBGCP4Q9UGJ1 667 aa8.49□□□□□ -1.05
SCN9A-203ENST00000409672 EFCAB10A6NFE3 127 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 A8MUI8 341 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 AREL1O15033 823 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 SSTR1P30872 391 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 GRSF1Q12849 480 aaKnown RBP eCLIP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RFX4Q33E94 735 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ZIK1Q3SY52 487 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FBXO22Q8NEZ5 403 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 OR52K1Q8NGK4 314 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 FAM110BQ8TC76 370 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ADAM30Q9UKF2 790 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 OR5F1O95221 314 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 GNPDA1P46926 289 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 PAFAH2Q99487 392 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DCLK3Q9C098 648 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RPTORQ8N122 1335 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 DNALI1O14645 258 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-203ENST00000409672 UBDO15205 165 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 KCNA5P22460 613 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 ITPKAP23677 461 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 HSD3B2P26439 372 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 RCVRNP35243 200 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 HK2P52789 917 aa8.48□□□□□ -1.05
SCN9A-203ENST00000409672 CELF3Q5SZQ8 465 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms