RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 IGHV4-34P06331 123 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SLC2A3P11169 496 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 GLDCP23378 1020 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 CSNK1EP49674 416 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 PHEXP78562 749 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 CDR2Q01850 454 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 PTP4A2Q12974 167 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 EIF2B5Q13144 721 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 CST6Q15828 149 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 TSR1Q2NL82 804 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 C15orf59Q2T9L4 293 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SLC25A52Q3SY17 297 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 POM121L1PQ3SYA9 428 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ANO6Q4KMQ2 910 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF776Q68DI1 518 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FAAH2Q6GMR7 532 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 TFAP2DQ7Z6R9 452 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FAM131BQ86XD5 332 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ZDHHC17Q8IUH5 632 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 CCDC117Q8IWD4 279 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF557Q8N988 423 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 JOSD2Q8TAC2 188 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 GIMAP1Q8WWP7 306 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 PGAP3Q96FM1 320 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 TSC22D3Q99576 134 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 C11orf70Q9BRQ4 267 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FEM1AQ9BSK4 669 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FUCA2Q9BTY2 467 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 BTBD1Q9H0C5 482 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 WDCPQ9H6R7 721 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 NPDC1Q9NQX5 325 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ANO10Q9NW15 660 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 FBXL12Q9NXK8 326 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 MPP6Q9NZW5 540 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SLC12A6Q9UHW9 1150 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 SARDHQ9UL12 918 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 WASF3Q9UPY6 502 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 COMMD10Q9Y6G5 202 aa9.9□□□□□ -0.83
NIF3L1-202ENST00000409020 ANKRD11Q6UB99 2663 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 ZFYVE26Q68DK2 2539 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 BPTFQ12830 3046 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 A0A0D9SEW6 157 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 EDDM13A0A1B0GTR0 161 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 A0A1B0GTW7 788 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 A0A1B0GVT2 93 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 K7ERQ8 282 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 KCNK3O14649 394 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 WNT9AO14904 365 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 BCAT2O15382 392 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 TEX33O43247 280 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 OPHN1O60890 802 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 RNASEH2AO75792 299 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 KIAA0754O94854 1291 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 MOCS3O95396 460 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 CSRP1P21291 193 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 MMP8P22894 467 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 DPP6P42658 865 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 ATP11AP98196 1134 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 UBXN1Q04323 297 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 FOXC1Q12948 553 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 ARID5BQ14865 1188 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 CDO1Q16878 200 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 CCDC14Q49A88 953 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 FKBP15Q5T1M5 1219 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 RNF219Q5W0B1 726 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 TMC6Q7Z403 805 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 LCA5Q86VQ0 697 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 MYO1HQ8N1T3 1032 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 KDM1BQ8NB78 822 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 GANCQ8TET4 914 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 PSMB7Q99436 277 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 NEUROG2Q9H2A3 272 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 TM9SF3Q9HD45 589 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 VPS28Q9UK41 221 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 CROTQ9UKG9 612 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 FNDC3AQ9Y2H6 1198 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 E9PAM4 449 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 MAP3K7O43318 606 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SMAD6O43541 496 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 SRGAP2O75044 1071 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 IL1BP01584 269 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 TUBBP07437 444 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 UNGP13051 313 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 CEACAM1P13688 526 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 FOSL1P15407 271 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 GNSP15586 552 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 DRD3P35462 400 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 PLK1P53350 603 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 GALCP54803 685 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 INHBCP55103 352 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ZBTB16Q05516 673 aa9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-202ENST00000409020 KIF19Q2TAC6 998 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms