RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	ZNF385B	Q569K4	471 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CCNI2	Q6ZMN8	369 aa	Predicted RBP	7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CCDC73	Q6ZRK6	1079 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TADA2B	Q86TJ2	420 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	WDR49	Q8IV35	697 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CCDC65	Q8IXS2	484 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	NXPE1	Q8N323	547 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	LINC00482	Q8N8I6	264 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CXorf38	Q8TB03	319 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	IPO4	Q8TEX9	1081 aa	Known RBP	7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SETD7	Q8WTS6	366 aa	Known RBP	7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	KBTBD7	Q8WVZ9	684 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	TNIP3	Q96KP6	325 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	GORASP1	Q9BQQ3	440 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	CBWD1	Q9BRT8	395 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	MED10	Q9BTT4	135 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	LRRC27	Q9C0I9	530 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	PCIF1	Q9H4Z3	704 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SPHK2	Q9NRA0	654 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	COMMD8	Q9NX08	183 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	WDR35	Q9P2L0	1181 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SMC3	Q9UQE7	1217 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	NFE2L3	Q9Y4A8	694 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	PKD1L2	Q7Z442	2459 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	SDK1	Q7Z5N4	2213 aa		7.09	□□□□□ -1.27
CEACAM1-208	ENST00000403461	GREB1	Q4ZG55	1949 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461		A0A1W2PQF6	199 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ANTXRL	A6NF34	631 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PRAMEF25	A6NGN4	478 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF891	A8MT65	544 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461		A8MXQ7	604 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	NEDD8-MDP1	E9PL57	170 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	NPC1	O15118	1278 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FLRT2	O43155	660 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SYNCRIP	O60506	623 aa	Known RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ENO2	P09104	434 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DLAT	P10515	647 aa	Known RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	IRF1	P10914	325 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ACADM	P11310	421 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TNNI1	P19237	187 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PI3	P19957	117 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GJB2	P29033	226 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	STAT6	P42226	847 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF132	P52740	706 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SLC5A3	P53794	718 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LINC00310	P59036	64 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DBP	Q10586	325 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GRIK2	Q13002	908 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	INAVA	Q3KP66	663 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	WDR72	Q3MJ13	1102 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CD276	Q5ZPR3	534 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TOGARAM2	Q6ZUX3	1019 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TRAPPC11	Q7Z392	1133 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LIMS2	Q7Z4I7	341 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GLRX5	Q86SX6	157 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SFTPA1	Q8IWL2	248 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	BBS7	Q8IWZ6	715 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GALNT15	Q8N3T1	639 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	UBR7	Q8N806	425 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PNPLA1	Q8N8W4	532 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	B3GALNT2	Q8NCR0	500 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CADM4	Q8NFZ8	388 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	OR2I1P	Q8NGU4	316 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	UCMA	Q8WVF2	138 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SMARCD1	Q96GM5	515 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF419	Q96HQ0	510 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	LRIG1	Q96JA1	1093 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CAMK1G	Q96NX5	476 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	NOX5	Q96PH1	765 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	GABRG3	Q99928	467 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SYT3	Q9BQG1	590 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	MRPL45	Q9BRJ2	306 aa	Known RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	STRA6	Q9BX79	667 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	BBS2	Q9BXC9	721 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF518B	Q9C0D4	1074 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	IKZF4	Q9H2S9	585 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	FBXO44	Q9H4M3	255 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DMAP1	Q9NPF5	467 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PANK4	Q9NVE7	773 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PMF1-BGLAP	U3KQ54	211 aa		7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.08	□□□□□ -1.28
CEACAM1-208	ENST00000403461	NPIPB6	E9PJ23	425 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	DVL2	O14641	736 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CACNG3	O60359	315 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	PLA2G1B	P04054	148 aa	Known RBP	7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ZNF883	P0CG24	379 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	P4HA1	P13674	534 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	TYR	P14679	529 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CFP	P27918	469 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	OXTR	P30559	389 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	SDHA	P31040	664 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	ATIC	P31939	592 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	MATK	P42679	507 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	CASP5	P51878	434 aa		7.07	□□□□□ -1.28
CEACAM1-208	ENST00000403461	KIF11	P52732	1056 aa		7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms