RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KCNK3O14649 394 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ENC1O14682 589 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 KIF5CO60282 957 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 IGLV3-19P01714 112 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CCNB1P14635 433 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CD6P30203 668 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NBL1P41271 181 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 MMP13P45452 471 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 RENBPP51606 427 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 MAXP61244 160 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NSUN2Q08J23 767 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 HNRNPDQ14103 355 aaKnown RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 LPAL2Q16609 132 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TTC31Q49AM3 519 aaPredicted RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PRR23BQ6ZRT6 265 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SRLQ86TD4 932 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 KBTBD6Q86V97 674 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZC3H18Q86VM9 953 aaKnown RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 DEFB119Q8N690 84 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TEX26Q8N6G2 289 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ARRDC3Q96B67 414 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZNF419Q96HQ0 510 aaPredicted RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SPACA7Q96KW9 195 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PHOX2BQ99453 314 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 FAM118BQ9BPY3 351 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NEUROG2Q9H2A3 272 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 RBM22Q9NW64 420 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 WSB2Q9NYS7 404 aaPredicted RBP17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NCKAP1Q9Y2A7 1128 aa17.43■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TCRBV7S2A1N4TA0A589 114 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 APOC4-APOC2K7ER74 178 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PPP1R12AO14974 1030 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 JCHAINP01591 159 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 APOC2P02655 101 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 OXTRP30559 389 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ACSL1P33121 698 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 DRD3P35462 400 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CSNK1DP48730 415 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SCNN1BP51168 640 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NHLH1Q02575 133 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 RAD51Q06609 339 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CNTN1Q12860 1018 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 GDPD4Q6W3E5 623 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 USP30Q70CQ3 517 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 BBS5Q8N3I7 341 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 C17orf53Q8N3J3 647 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ACTL9Q8TC94 416 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TFB1MQ8WVM0 346 aaKnown RBP17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 FATE1Q969F0 183 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 C10orf88Q9H8K7 445 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NT5MQ9NPB1 228 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 JRKLQ9Y4A0 524 aa17.42■□□□□ 0.38
PTCHD3P3-201ENST00000403073 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 GOLGA6L9A6NEM1 432 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PIGNO95427 931 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 UGT2B4P06133 528 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CXCR5P32302 372 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 OTUD4Q01804 1114 aaKnown RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZNF33AQ06730 810 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ITKQ08881 620 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SFSWAPQ12872 951 aaKnown RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NOMO1Q15155 1222 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 PLK5Q496M5 336 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SEL1L2Q5TEA6 688 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TMEFF1Q8IYR6 380 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 LRIG1Q96JA1 1093 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 KLHL32Q96NJ5 620 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 MGME1Q9BQP7 344 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 GPR174Q9BXC1 333 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CEP41Q9BYV8 373 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CPEB1Q9BZB8 566 aaKnown RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 BRD8Q9H0E9 1235 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 DUSP15Q9H1R2 295 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CARD9Q9H257 536 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 EPC1Q9H2F5 836 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SEPT10Q9P0V9 454 aa17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ARIH1Q9Y4X5 557 aaPredicted RBP17.41■□□□□ 0.38
PTCHD3P3-201ENST00000403073 WDFY4Q6ZS81 3184 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 MYO18AQ92614 2054 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NYNRINQ9P2P1 1898 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 H7C0C1 242 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NDUFS2O75306 463 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NEBLO76041 1014 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CR2P20023 1033 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 HSPA9P38646 679 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ATP5OP48047 213 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 EIF3EP60228 445 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 IFI35P80217 286 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 RPL6Q02878 288 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZBTB17Q13105 803 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 KLF1Q13351 362 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NCEH1Q6PIU2 408 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SLC36A4Q6YBV0 504 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ADAT2Q7Z6V5 191 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SLC13A5Q86YT5 568 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms