RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ZBTB24O43167 697 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-204ENST00000401473 CD68P34810 354 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-204ENST00000401473 MAGEA9P43362 315 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 CXCL12P48061 93 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 SCNN1BP51168 640 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 CCNHP51946 323 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-204ENST00000401473 ZNF235Q14590 738 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 CYP1B1Q16678 543 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 MYLK3Q32MK0 819 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 PRUNE1Q86TP1 453 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 C1orf210Q8IVY1 113 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 ZNF567Q8N184 647 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 GLIS1Q8NBF1 620 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 KIF18AQ8NI77 898 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 TEKT5Q96M29 485 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 FRMD8P1Q9BZ68 369 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-204ENST00000401473 RNF14Q9UBS8 474 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 EVLQ9UI08 416 aaPredicted RBP16.17■□□□□ 0.18
HMGA1-204ENST00000401473 ZNF148Q9UQR1 794 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 KMT2EQ8IZD2 1858 aa16.17■□□□□ 0.18
HMGA1-204ENST00000401473 ITGAVP06756 1048 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 DGKEP52429 567 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 METAP1P53582 386 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 SNRPD1P62314 119 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 ELAVL3Q14576 367 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 TMPRSS6Q8IU80 811 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 CDKL3Q8IVW4 592 aaPredicted RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 MAGOHBQ96A72 148 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 MRGPRX1Q96LB2 322 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 HHIPQ96QV1 700 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 NOD2Q9HC29 1040 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 CDC23Q9UJX2 597 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 PPM1HQ9ULR3 514 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 DRG1Q9Y295 367 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 TTLL3Q9Y4R7 772 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 WASF2Q9Y6W5 498 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 K7ESF4 209 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 MTSS1O43312 755 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 GSRP00390 522 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 GABRG2P18507 467 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 STIP1P31948 543 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 NIPAL4Q0D2K0 466 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 STARD3Q14849 445 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 ARSIQ5FYB1 569 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 PID1Q7Z2X4 250 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 MMAAQ8IVH4 418 aaKnown RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 OR2T3Q8NH03 318 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 ARRDC2Q8TBH0 407 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 CCDC110Q8TBZ0 833 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 RSPH9Q9H1X1 276 aaPredicted RBP16.16■□□□□ 0.18
HMGA1-204ENST00000401473 HOMER3Q9NSC5 361 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
HMGA1-204ENST00000401473 ABCA7Q8IZY2 2146 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 TCRBV21S2A2A0A5A6 115 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 LEFTY1O75610 366 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 POP4O95707 220 aaKnown RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 C7P10643 843 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ETS1P14921 441 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 CHRNA3P32297 505 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 PXNP49023 591 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 DSC2Q02487 901 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ITKQ08881 620 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ANKRD20A2Q5SQ80 823 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ANKRD20A1Q5TYW2 823 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ANKRD20A3Q5VUR7 823 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 ALG1LQ6GMV1 187 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 CACUL1Q86Y37 369 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 RYBPQ8N488 228 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 C12orf50Q8NA57 414 aaPredicted RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 MDGA1Q8NFP4 955 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 GDAP1L1Q96MZ0 367 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 SEMA3CQ99985 751 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 HEPHQ9BQS7 1158 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 IER2Q9BTL4 223 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 POLR1EQ9GZS1 481 aaKnown RBP16.15■□□□□ 0.18
HMGA1-204ENST00000401473 BPTFQ12830 3046 aa16.15■□□□□ 0.18
HMGA1-204ENST00000401473 C5orf60A6NFR6 353 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 IGSF6O95976 241 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 MMP2P08253 660 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 NDUFV2P19404 249 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 COILP38432 576 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CSNK1DP48730 415 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 POM121L1PQ3SYA9 428 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CCDC137Q6PK04 289 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 SRLQ86TD4 932 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CAMK1DQ8IU85 385 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 BBS5Q8N3I7 341 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 GRIN3AQ8TCU5 1115 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 HMGB4Q8WW32 186 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 OR8D1Q8WZ84 308 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 RTP4Q96DX8 246 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 NUDCD1Q96RS6 583 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 VAT1Q99536 393 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 DDX47Q9H0S4 455 aaKnown RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 ZDHHC6Q9H6R6 413 aa16.14■□□□□ 0.17
HMGA1-204ENST00000401473 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
HMGA1-204ENST00000401473 CD93Q9NPY3 652 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms