RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 HBS1LQ9Y450 684 aaKnown RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 MAGEB16A2A368 324 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 NEMP2A6NFY4 417 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 USP1O94782 785 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 AP2A1O95782 977 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 ZNF865P0CJ78 1059 aaPredicted RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 GATMP50440 423 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 SEMA5AQ13591 1074 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 CYTH1Q15438 398 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 FUT11Q495W5 492 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 C6orf10Q5SRN2 563 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 PTRHD1Q6GMV3 140 aaKnown RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 MRNIPQ6NTE8 343 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 PRSS55Q6UWB4 352 aaPredicted RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 ZNF280BQ86YH2 543 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 RBM15BQ8NDT2 890 aaKnown RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 NXNL1Q96CM4 212 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 SCLYQ96I15 445 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 TRPM5Q9NZQ8 1165 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 E9PAM4 449 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 TYROBPO43914 113 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 PRKCGP05129 697 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 IL4RP24394 825 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 KLC1Q07866 573 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 IZUMO2Q6UXV1 221 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 TPGS1Q6ZTW0 290 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 ARHGAP18Q8N392 663 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 TRIB2Q92519 343 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 NPY6RQ99463 290 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 VAT1Q99536 393 aa13.66□□□□□ -0.22
SIRPA-203ENST00000400068 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
SIRPA-203ENST00000400068 OR51F1A6NGY5 319 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 KCNE1P15382 129 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 GALNTL6Q49A17 601 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 MAMDC4Q6UXC1 1216 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 RNF208Q9H0X6 261 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 SLC12A4Q9UP95 1085 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-203ENST00000400068 PLIN3O60664 434 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 SEC24DO94855 1032 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-203ENST00000400068 CRHR1P34998 444 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 PTDSS1P48651 473 aaKnown RBP13.65□□□□□ -0.22
SIRPA-203ENST00000400068 INHBEP58166 350 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 CCDC153Q494R4 210 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 KRT80Q6KB66 452 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 DCBLD1Q8N8Z6 715 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 ZNF778Q96MU6 729 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 CDRT15Q96T59 188 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
SIRPA-203ENST00000400068 SAR1AQ9NR31 198 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 TRIM16O95361 564 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 SCUBE2Q9NQ36 999 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 COPG2Q9UBF2 871 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 SLC2A6Q9UGQ3 507 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
SIRPA-203ENST00000400068 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 NUP205Q92621 2012 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 C9JVG2 144 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 GUCA1CO95843 209 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 MPOP05164 745 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 TSHRP16473 764 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 RECQLP46063 649 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-203ENST00000400068 BTKQ06187 659 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 CYLC2Q14093 348 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-203ENST00000400068 TMEM259Q4ZIN3 620 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
SIRPA-203ENST00000400068 CYP2R1Q6VVX0 501 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 LZTR1Q8N653 840 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 ZNF781Q8N8C0 355 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 TMEM174Q8WUU8 243 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 ACBD6Q9BR61 282 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 ENTPD7Q9NQZ7 604 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 KANSL3Q9P2N6 904 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 ANGPT2O15123 496 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 GSC2O15499 205 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 TOMM70O94826 608 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 CHRNA1P02708 482 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 CHRNGP07510 517 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 CCR10P46092 362 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 RHOAP61586 193 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
SIRPA-203ENST00000400068 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-203ENST00000400068 SLC24A5Q71RS6 500 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms