RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 VAV1P15498 845 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 CA4P22748 312 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 CES1P23141 567 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 PTPN3P26045 913 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 TARSP26639 723 aaKnown RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 IL12RB1P42701 662 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 MAPK8P45983 427 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 MAXP61244 160 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 IFI35P80217 286 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 BASP1P80723 227 aaKnown RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 BCL2L1Q07817 233 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 GPS1Q13098 491 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ZBTB17Q13105 803 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 CYTH1Q15438 398 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 SIX1Q15475 284 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 PTPRNQ16849 979 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 P3H1Q32P28 736 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 HSF5Q4G112 596 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ANKRD20A2Q5SQ80 823 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ANKRD20A1Q5TYW2 823 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ANKRD20A3Q5VUR7 823 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 C8orf74Q6P047 294 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 DRICH1Q6PGQ1 229 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 C4orf22Q6V702 233 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 SRLQ86TD4 932 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ZNF567Q8N184 647 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 KDM1BQ8NB78 822 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 OR6K2Q8NGY2 324 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 GRIN3AQ8TCU5 1115 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 IFT43Q96FT9 208 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 SPATA13Q96N96 652 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 PPP1R2P1Q96PQ5 205 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ACOX2Q99424 681 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 SEMA3CQ99985 751 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 TRIM31Q9BZY9 425 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 ATP13A3Q9H7F0 1226 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 GLOD4Q9HC38 313 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 PAK5Q9P286 719 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 AMACRQ9UHK6 382 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 UTP11Q9Y3A2 253 aaKnown RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 STARD13Q9Y3M8 1113 aa9.06□□□□□ -0.96
BRCC3-206ENST00000399042 MTF2Q9Y483 593 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
BRCC3-206ENST00000399042 CXorf51AA0A1B0GTR3 108 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 TARSL2A2RTX5 802 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 C5orf60A6NFR6 353 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 TMEM221A6NGB7 291 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 C1QTNF3-AMACRE9PGA6 284 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 M0R296 226 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 KPNA3O00505 521 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 GCATO75600 419 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 ANXA9O76027 345 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 ALDH1A2O94788 518 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 GSRP00390 522 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 IL1BP01584 269 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 HLA-DQB2P05538 268 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 DCNP07585 359 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 SERPINF2P08697 491 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 ACADMP11310 421 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 HNRNPLP14866 589 aaKnown RBP eCLIP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 ETS1P14921 441 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 NFKB1P19838 968 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 PRKCHP24723 683 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 SERPINA4P29622 427 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 CD86P42081 329 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 EPHB1P54762 984 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 GDF10P55107 478 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 AP1S1P61966 158 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 MRPS25P82663 173 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 CCINQ13939 588 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 OASLQ15646 514 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 PCSK7Q16549 785 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 CYP1B1Q16678 543 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 MYLK3Q32MK0 819 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 HNRNPA1L2Q32P51 320 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 FAM182AQ5T1J6 154 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 FAM46CQ5VWP2 391 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 TTC27Q6P3X3 843 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 SYDE1Q6ZW31 735 aaPredicted RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 KDELC2Q7Z4H8 507 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 CACUL1Q86Y37 369 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 NDUFAF2Q8N183 169 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 STK40Q8N2I9 435 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 IL17RCQ8NAC3 791 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 PJA1Q8NG27 643 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 OR2AP1Q8NGE2 309 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 MAML1Q92585 1016 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 FATE1Q969F0 183 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
BRCC3-206ENST00000399042 ISG20Q96AZ6 181 aaKnown RBP9.05□□□□□ -0.96
BRCC3-206ENST00000399042 MRGPRX3Q96LB0 322 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms