RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TBC1D3HP0C7X1 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 FECHP22830 423 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 AMPD1P23109 780 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 ITGB7P26010 798 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 MAN1A1P33908 653 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 MAPK8P45983 427 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 DNA2P51530 1060 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 AFF3P51826 1226 aaKnown RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 TAS2R40P59535 323 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 SNRPD1P62314 119 aaKnown RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 TCEAL1Q15170 157 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 MYLK3Q32MK0 819 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 ATP13A4Q4VNC1 1196 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 ATXN7L2Q5T6C5 722 aaPredicted RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3GQ6DHY5 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3CQ6IPX1 549 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 ARHGAP36Q6ZRI8 547 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 ERN2Q76MJ5 926 aaKnown RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 TBC1D3Q8IZP1 549 aaPredicted RBP16.97■□□□□ 0.31
APTR-201ENST00000398043 NETO2Q8NC67 525 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 SLC35G2Q8TBE7 412 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 LRIG1Q96JA1 1093 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 PREBQ9HCU5 417 aa16.97■□□□□ 0.31
APTR-201ENST00000398043 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 A0A1W2PR77 199 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 ARHGAP42A6NI28 874 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 DAPK3O43293 454 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 WNT1P04628 370 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 CD48P09326 243 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 CD59P13987 128 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 RACK1P63244 317 aaKnown RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 NEK5Q6P3R8 708 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 LAYNQ6UX15 382 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 PARS2Q7L3T8 475 aaKnown RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 PIP4P1Q86T03 277 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 OR6K2Q8NGY2 324 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 GTPBP2Q9BX10 602 aaKnown RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 ZDHHC6Q9H6R6 413 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 RCOR3Q9P2K3 495 aaPredicted RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 UBA2Q9UBT2 640 aaPredicted RBP16.96■□□□□ 0.31
APTR-201ENST00000398043 LCMT1Q9UIC8 334 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 INTUQ9ULD6 942 aa16.96■□□□□ 0.31
APTR-201ENST00000398043 VILLO15195 856 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 SPINT1O43278 529 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 PEX11BO96011 259 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 ADRB3P13945 408 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 ARL4AP40617 200 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 NEK3P51956 506 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 MMRN1Q13201 1228 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 ZNF805Q5CZA5 627 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 PPM1JQ5JR12 505 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 ZNF354CQ86Y25 554 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 PPP1R16AQ96I34 528 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 GDAP1L1Q96MZ0 367 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 CPEB1Q9BZB8 566 aaKnown RBP16.95■□□□□ 0.3
APTR-201ENST00000398043 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 ZFR2Q9UPR6 939 aaKnown RBP16.95■□□□□ 0.3
APTR-201ENST00000398043 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 SNX11Q9Y5W9 270 aa16.95■□□□□ 0.3
APTR-201ENST00000398043 KRIT1O00522 736 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 INSIG1O15503 277 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 AP1G1O43747 822 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 OPHN1O60890 802 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 KCNK5O95279 499 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 CSRP1P21291 193 aaKnown RBP16.94■□□□□ 0.3
APTR-201ENST00000398043 NUDT1P36639 197 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 RGRP47804 291 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 CDH6P55285 790 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 RHOAP61586 193 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 FOXK2Q01167 660 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 IL10RBQ08334 325 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 CCDC15Q0P6D6 951 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 DPYSL3Q14195 570 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 HADHQ16836 314 aaKnown RBP16.94■□□□□ 0.3
APTR-201ENST00000398043 ZNF284Q2VY69 593 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 TMEM259Q4ZIN3 620 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 RHOT2Q8IXI1 618 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 RFFLQ8WZ73 363 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 FAF2Q96CS3 445 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 PANX2Q96RD6 677 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 OSBPL1AQ9BXW6 950 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 IPO11Q9UI26 975 aaKnown RBP16.94■□□□□ 0.3
APTR-201ENST00000398043 FADS3Q9Y5Q0 445 aa16.94■□□□□ 0.3
APTR-201ENST00000398043 C16orf96A6NNT2 1141 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 RNGTTO60942 597 aaKnown RBP16.93■□□□□ 0.3
APTR-201ENST00000398043 IGSF6O95976 241 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 UGT2B4P06133 528 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 ZNF883P0CG24 379 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 ARHGAP25P42331 645 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 ABL2P42684 1182 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 CTSKP43235 329 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 CSNK1DP48730 415 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 ATXN3P54252 364 aaPredicted RBP16.93■□□□□ 0.3
APTR-201ENST00000398043 SLC14A1Q13336 389 aa16.93■□□□□ 0.3
APTR-201ENST00000398043 TEAD4Q15561 434 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms