RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 RFWD3Q6PCD5 774 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 PHYKPLQ8IUZ5 450 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 REXO5Q96IC2 774 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 DLGAP3O95886 979 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 ITGB3BPQ13352 177 aaPredicted RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 SCLYQ96I15 445 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 MAT2BQ9NZL9 334 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 COQ6Q9Y2Z9 468 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 KLRG2A4D1S0 409 aaPredicted RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 ERAL1O75616 437 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 SLC25A12O75746 678 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 ATG7O95352 703 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 FTH1P02794 183 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 C1DQ13901 141 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 CNGA2Q16280 664 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 POMZP3Q6PJE2 187 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 VPS33AQ96AX1 596 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 VAT1Q99536 393 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 GPR20Q99678 358 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 DUSP9Q99956 384 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 B3GNT5Q9BYG0 378 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 RABGGTBP53611 331 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 TRIM71Q2Q1W2 868 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 LINGO4Q6UY18 593 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 CHST9Q7L1S5 443 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 S100A13Q99584 98 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 PRRG4Q9BZD6 226 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 IL22Q9GZX6 179 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 RIBC2Q9H4K1 309 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.572e-6■■□□□ 13.7
TTC28-201ENST00000397906 MAT2AP31153 395 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 PCBP1Q15365 356 aaKnown RBP eCLIP11.46□□□□□ -0.57
TTC28-201ENST00000397906 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 DUSP16Q9BY84 665 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 BTRCQ9Y297 605 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 GTPBP1O00178 669 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 STBD1O95210 358 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 ITGB5P18084 799 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 TCEA1P23193 301 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 CLK3P49761 638 aaKnown RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 TAF10Q12962 218 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 NEPROQ6NW34 567 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 KIAA1522Q9P206 1035 aaPredicted RBP11.46□□□□□ -0.57
TTC28-201ENST00000397906 DEC1Q9P2X7 70 aa11.46□□□□□ -0.57
TTC28-201ENST00000397906 A0A0A0MRY4 1105 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ERN1O75460 977 aaKnown RBP11.46□□□□□ -0.58
TTC28-201ENST00000397906 SPATA13Q96N96 652 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 NRDE2Q9H7Z3 1164 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 DNAJC18Q9H819 358 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 SERPINE1P05121 402 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ATP4AP20648 1035 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 IRAK1P51617 712 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 STX4Q12846 297 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 AFTPHQ6ULP2 937 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 SLC24A5Q71RS6 500 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ANKS1BQ7Z6G8 1248 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.58
TTC28-201ENST00000397906 MC4RP32245 332 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 DEFA1P59665 94 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 DEFA3P59666 94 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 SLC24A2Q9UI40 661 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 SLC27A6Q9Y2P4 619 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 PCDHA11Q9Y5I1 949 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 GRM6O15303 877 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.58
TTC28-201ENST00000397906 LBPP18428 481 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 ERVK-21P61565 698 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 GTF2BQ00403 316 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.58
TTC28-201ENST00000397906 ACAP1Q15027 740 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 SCIMPQ6UWF3 145 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 OR8H2Q8N162 312 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 COG5Q9UP83 839 aa11.46□□□□□ -0.58
TTC28-201ENST00000397906 MAGEC1O60732 1142 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 POLR1BQ9H9Y6 1135 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 PDE2AO00408 941 aaPredicted RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 PEX1O43933 1283 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 FGFR3P22607 806 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 TTPAP49638 278 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 C2CD2Q9Y426 696 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 KANSL1LA0AUZ9 987 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 CNOT3O75175 753 aaKnown RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 CALB2P22676 271 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 EID3Q8N140 333 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 ZMAT2Q96NC0 199 aaKnown RBP11.45□□□□□ -0.58
TTC28-201ENST00000397906 ARMCX1Q9P291 453 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 C1RP00736 705 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 PIK3CGP48736 1102 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 CRHR2Q13324 411 aa11.45□□□□□ -0.58
TTC28-201ENST00000397906 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms