RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PRRT4C9JH25 899 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 MAN2B1O00754 1011 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 ERLIN1O75477 346 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 AP2A1O95782 977 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 RECQLP46063 649 aaPredicted RBP23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 STK19P49842 368 aaPredicted RBP23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 PLTPP55058 493 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 MAXP61244 160 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 GRSF1Q12849 480 aaKnown RBP eCLIP23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 GRM3Q14832 879 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 ACCSLQ4AC99 568 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 FAXCQ5TGI0 409 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 NAPEPLDQ6IQ20 393 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 LINC00523Q86TU6 105 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 MCUQ8NE86 351 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 OR2AP1Q8NGE2 309 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 EPC1Q9H2F5 836 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 HEBP1Q9NRV9 189 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 ACTL7AQ9Y615 435 aa23.89■■□□□ 1.42
TSPAN4-202ENST00000397396 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 INSIG1O15503 277 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 CR2P20023 1033 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 CARSP49589 748 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 GALK1P51570 392 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 VSNL1P62760 191 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 RAD51Q06609 339 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 DLG2Q15700 870 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 FNDC3BQ53EP0 1204 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 CCNI2Q6ZMN8 369 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 TAB3Q8N5C8 712 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 ARRDC2Q8TBH0 407 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 KCNV2Q8TDN2 545 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 PRCCQ92733 491 aaPredicted RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 MRGPRX3Q96LB0 322 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 FMO2Q99518 471 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 FSD1LQ9BXM9 530 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 PHACTR1Q9C0D0 580 aa23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 XAB2Q9HCS7 855 aaKnown RBP23.88■■□□□ 1.41
TSPAN4-202ENST00000397396 K7ERQ8 282 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 MUSKO15146 869 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 SMAD6O43541 496 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 NARSO43776 548 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 SUN1O94901 812 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 CD86P42081 329 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 SCNN1BP51168 640 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 DSC2Q02487 901 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 BRD3Q15059 726 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 PTPRNQ16849 979 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 PDCD7Q8N8D1 485 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 FBXO25Q8TCJ0 367 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 CYB5D2Q8WUJ1 264 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 RBM15Q96T37 977 aaKnown RBP eCLIP23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 HINFPQ9BQA5 517 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 ZDHHC18Q9NUE0 388 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 ARGLU1Q9NWB6 273 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 NFU1Q9UMS0 254 aa23.87■■□□□ 1.41
TSPAN4-202ENST00000397396 PPFIA2O75334 1257 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 HNRNPLP14866 589 aaKnown RBP eCLIP23.86■■□□□ 1.415e-7■□□□□ 11.2
TSPAN4-202ENST00000397396 PRKCQQ04759 706 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 NIPAL4Q0D2K0 466 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 NAA30Q147X3 362 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 FBXO43Q4G163 708 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 SLC44A4Q53GD3 710 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 CARD16Q5EG05 197 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 TMEM196Q5HYL7 178 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 KCTD11Q693B1 232 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 ZDHHC24Q6UX98 284 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 TRMT11Q7Z4G4 463 aaKnown RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 SRLQ86TD4 932 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 ZCCHC9Q8N567 271 aaKnown RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 TADA1Q96BN2 335 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 OXNAD1Q96HP4 312 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 TUBGCP5Q96RT8 1024 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 TM6SF2Q9BZW4 377 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 THAP10Q9P2Z0 257 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 ARIH1Q9Y4X5 557 aaPredicted RBP23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 MIA3Q5JRA6 1907 aa23.86■■□□□ 1.41
TSPAN4-202ENST00000397396 EDDM13A0A1B0GTR0 161 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 CCDC151A5D8V7 595 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 F5H423 210 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 MLNP12872 115 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 ARL4CP56559 192 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SKOR1P84550 965 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 MESP2Q0VG99 397 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 MLF2Q15773 248 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 KCTD19Q17RG1 926 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 DGKKQ5KSL6 1271 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 NAIF1Q69YI7 327 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 PRPF39Q86UA1 669 aaKnown RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 PDIK1LQ8N165 341 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SPATA22Q8NHS9 363 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 FRS2Q8WU20 508 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SORCS1Q8WY21 1168 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 EXOC2Q96KP1 924 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 ASB2Q96Q27 587 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 GORASP1Q9BQQ3 440 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 MLPHQ9BV36 600 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SUN2Q9UH99 717 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SLCO3A1Q9UIG8 710 aa23.85■■□□□ 1.41
TSPAN4-202ENST00000397396 SPTBN5Q9NRC6 3674 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms