RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FBF1Q8TES7 1133 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 TFB1MQ8WVM0 346 aaKnown RBP15.16■□□□□ 0.02
CAPN3-207ENST00000397200 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 SGSM3Q96HU1 749 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 SLC2A11Q9BYW1 496 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 CLEC4EQ9ULY5 219 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 CHMP2BQ9UQN3 213 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 FAM169AQ9Y6X4 670 aa15.16■□□□□ 0.02
CAPN3-207ENST00000397200 COL4A3Q01955 1670 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 FAM47DPA6NHR8 397 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 ARHGAP42A6NI28 874 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 DFFAO00273 331 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 CACNG3O60359 315 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 METTL18O95568 372 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 GSTA2P09210 222 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 MX2P20592 715 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 YBEYP58557 167 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 GNA12Q03113 381 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 PPARDQ03181 441 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 POLD3Q15054 466 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 PARP15Q460N3 678 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 FSCBQ5H9T9 825 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 AFMIDQ63HM1 303 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF783Q6ZMS7 281 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 C3orf62Q6ZUJ4 267 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 PIGWQ7Z7B1 504 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF354CQ86Y25 554 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 ARHGAP12Q8IWW6 846 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 PALM2Q8IXS6 379 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 NETO2Q8NC67 525 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 WFDC5Q8TCV5 224 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 DENND1AQ8TEH3 1009 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 DCAKDQ8WVC6 231 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 HTR3CQ8WXA8 447 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 PAFAH2Q99487 392 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 SLC39A8Q9C0K1 460 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 MUC3BQ9H195 1237 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 MAGEH1Q9H213 219 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 NOL6Q9H6R4 1146 aaKnown RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 EIF2B3Q9NR50 452 aaKnown RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 KIAA1522Q9P206 1035 aaPredicted RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 SMG5Q9UPR3 1016 aaKnown RBP15.15■□□□□ 0.02
CAPN3-207ENST00000397200 CHD5Q8TDI0 1954 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 MIA3Q5JRA6 1907 aa15.15■□□□□ 0.02
CAPN3-207ENST00000397200 TCRBV9S1A1TA0A576 114 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 NCAM2O15394 837 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 FAM155BO75949 473 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 FDFT1P37268 417 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ETFBP38117 255 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CDK16Q00536 496 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TDGQ13569 410 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 EFTUD2Q15029 972 aaKnown RBP eCLIP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 PDK1Q15118 436 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 GKAP1Q5VSY0 366 aaPredicted RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 RNF219Q5W0B1 726 aaPredicted RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CAPN12Q6ZSI9 719 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TP53INP2Q8IXH6 220 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 LRRC34Q8IZ02 419 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 OR52K2Q8NGK3 314 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CYTH2Q99418 400 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TRABDQ9H4I3 376 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 PLAC1Q9HBJ0 212 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TTLL3Q9Y4R7 772 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 NYNRINQ9P2P1 1898 aaKnown RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 KIAA1549LQ6ZVL6 1849 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 PPP1R12AO14974 1030 aaPredicted RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TYROBPO43914 113 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 OPHN1O60890 802 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ASMTLO95671 621 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 STX2P32856 288 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CD70P32970 193 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 GJA4P35212 333 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CSKP41240 450 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 PAPOLAP51003 745 aaKnown RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 GALNT2Q10471 571 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 LMAN2Q12907 356 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 SLC12A1Q13621 1099 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 GAB4Q2WGN9 574 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ANKRD20A2Q5SQ80 823 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ANKRD20A1Q5TYW2 823 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ANKRD20A3Q5VUR7 823 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CPLX4Q7Z7G2 160 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 C12orf40Q86WS4 652 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ETFBKMTQ8IXQ9 262 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 CACNA2D3Q8IZS8 1091 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ATPAF2Q8N5M1 289 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 SLC44A1Q8WWI5 657 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 DNASE1L2Q92874 299 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 HMCESQ96FZ2 354 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 XAB2Q9HCS7 855 aaKnown RBP15.14■□□□□ 0.01
CAPN3-207ENST00000397200 TRPV5Q9NQA5 729 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 ABCB8Q9NUT2 735 aa15.14■□□□□ 0.01
CAPN3-207ENST00000397200 FBXO10Q9UK96 956 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms