RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CPEB1Q9BZB8 566 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 POLR1EQ9GZS1 481 aaKnown RBP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 RBM22Q9NW64 420 aaKnown RBP eCLIP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
AP1S3-202ENST00000396653 IL36AQ9UHA7 158 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 WASF2Q9Y6W5 498 aa16.66■□□□□ 0.26
AP1S3-202ENST00000396653 CFAP69A5D8W1 941 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 KCNK1O00180 336 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 MUSKO15146 869 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 AXIN1O15169 862 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 BNIP3LO60238 219 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 NEBLO76041 1014 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 C5AR1P21730 350 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 CES1P23141 567 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 CASQ1P31415 396 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 CSTF1Q05048 431 aaKnown RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 MYLK3Q32MK0 819 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 TTC31Q49AM3 519 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 TEX44Q53QW1 395 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 ATXN7L2Q5T6C5 722 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 DRICH1Q6PGQ1 229 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 WDR5BQ86VZ2 330 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 LONP2Q86WA8 852 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 PGBD5Q8N414 524 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 CHST14Q8NCH0 376 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 HTR3CQ8WXA8 447 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 OSBPL1AQ9BXW6 950 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 NT5MQ9NPB1 228 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 HOMER3Q9NSC5 361 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 R3HDM2Q9Y2K5 976 aaKnown RBP16.65■□□□□ 0.26
AP1S3-202ENST00000396653 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
AP1S3-202ENST00000396653 LIASO43766 372 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 ZNF217O75362 1048 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 JCHAINP01591 159 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 IGLV3-19P01714 112 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 DNTTP04053 509 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 HLA-DQB2P05538 268 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 CTSLP07711 333 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 PTPN3P26045 913 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 RBL1P28749 1068 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 RGRP47804 291 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 WASHC5Q12768 1159 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 CCNG2Q16589 344 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 DARS2Q6PI48 645 aaKnown RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 TSSK4Q6SA08 328 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 KIAA1324Q6UXG2 1013 aaKnown RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 USP30Q70CQ3 517 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 SRLQ86TD4 932 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 MMAAQ8IVH4 418 aaKnown RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 PGBD3Q8N328 593 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 RYBPQ8N488 228 aaPredicted RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 PIP4K2CQ8TBX8 421 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 VOPP1Q96AW1 172 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 PPP1R16AQ96I34 528 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 EXOC2Q96KP1 924 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 PABPC3Q9H361 631 aaKnown RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 ZDHHC6Q9H6R6 413 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 USP36Q9P275 1121 aaKnown RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 EVLQ9UI08 416 aaPredicted RBP16.64■□□□□ 0.25
AP1S3-202ENST00000396653 DNPEPQ9ULA0 475 aa16.64■□□□□ 0.25
AP1S3-202ENST00000396653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.63■□□□□ 0.25
AP1S3-202ENST00000396653 KRIT1O00522 736 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 LEFTY1O75610 366 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 STK10O94804 968 aaKnown RBP16.63■□□□□ 0.25
AP1S3-202ENST00000396653 IL1BP01584 269 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SP9P0CG40 484 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ACADMP11310 421 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 PSMD8P48556 350 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
AP1S3-202ENST00000396653 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 NCEH1Q6PIU2 408 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ADAT2Q7Z6V5 191 aaKnown RBP16.63■□□□□ 0.25
AP1S3-202ENST00000396653 KBTBD6Q86V97 674 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 CNTD1Q8N815 330 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 OR6K2Q8NGY2 324 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 GRIN3AQ8TCU5 1115 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ATG4AQ8WYN0 398 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 FAM131CQ96AQ9 280 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ERLEC1Q96DZ1 483 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 TEKT5Q96M29 485 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 FAM118BQ9BPY3 351 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SLC6A17Q9H1V8 727 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SCUBE2Q9NQ36 999 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ITM2CQ9NQX7 267 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 ZSCAN32Q9NX65 697 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SEPT10Q9P0V9 454 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 TRHDEQ9UKU6 1024 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 SARDHQ9UL12 918 aa16.63■□□□□ 0.25
AP1S3-202ENST00000396653 RNF103O00237 685 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms