RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MTF2Q9Y483 593 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 PER2O15055 1255 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 ALOX15BO15296 676 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 FAM58BPP0C7Q3 252 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 TNNI3P19429 210 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 CCNCP24863 283 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 NUP62P37198 522 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 AP1S1P61966 158 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 INO80DQ53TQ3 878 aaPredicted RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 TPGS2Q68CL5 300 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 KIAA0319LQ8IZA0 1049 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 DEPDC4Q8N2C3 294 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 RP9Q8TA86 221 aaKnown RBP15.8■□□□□ 0.12
GNE-202ENST00000396594 RAB23Q9ULC3 237 aa15.8■□□□□ 0.12
GNE-202ENST00000396594 A0A087X0B3 334 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TNFAIP8O95379 198 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 FYNP06241 537 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TARSP26639 723 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 PIWIL2Q8TC59 973 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 KCTD13Q8WZ19 329 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 NELL1Q92832 810 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 MBOAT7Q96N66 472 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TMEM175Q9BSA9 504 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 ZC4H2Q9NQZ6 224 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PHLPP1O60346 1717 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 KPNA3O00505 521 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 SEPT4O43236 478 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 ITGB5P18084 799 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 IRF8Q02556 426 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 VAC14Q08AM6 782 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 ITGA7Q13683 1181 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 MFSD4BQ5TF39 518 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 ZNF549Q6P9A3 640 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 CCDC33Q8N5R6 958 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PTCD3Q96EY7 689 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 C3orf14Q9HBI5 128 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PTPRJQ12913 1337 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 FCHO1O14526 889 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PRNPP04156 253 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 APODP05090 189 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PBLDP30039 288 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 SLC34A1Q06495 639 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 RALGPS1Q5JS13 557 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TTC23Q5W5X9 447 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 PROSER1Q86XN7 944 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TCF12Q99081 682 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 MAGEH1Q9H213 219 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TRPS1Q9UHF7 1281 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 SYNDIG1LA6NDD5 238 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 C5orf60A6NFR6 353 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 CENPXA8MT69 81 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 CILPO75339 1184 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 PIGRP01833 764 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 DRICH1Q6PGQ1 229 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 KCNK18Q7Z418 384 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 MOSPD2Q8NHP6 518 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 SENP6Q9GZR1 1112 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 POLE3Q9NRF9 147 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 AGO1Q9UL18 857 aaKnown RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 ERVW-1Q9UQF0 538 aa15.79■□□□□ 0.12
GNE-202ENST00000396594 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
GNE-202ENST00000396594 PIK3C2AO00443 1686 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TRIM24O15164 1050 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TNK2Q07912 1038 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ARHGAP17Q68EM7 881 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TFAP2DQ7Z6R9 452 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ZBTB45Q96K62 511 aaPredicted RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 PRICKLE1Q96MT3 831 aaPredicted RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 PCBD2Q9H0N5 130 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 DMGDHQ9UI17 866 aaKnown RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 DUSP10Q9Y6W6 482 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TBC1D3BA6NDS4 549 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TMEM191CA6NGB0 347 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 PFKMP08237 780 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 CDH4P55283 916 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 CRYMQ14894 314 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ZCWPW2Q504Y3 356 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ERICH5Q6P6B1 374 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 CXCL17Q6UXB2 119 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 MTDHQ86UE4 582 aaKnown RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 NPAS4Q8IUM7 802 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ATG16L2Q8NAA4 619 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TRAPPC12Q8WVT3 735 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 RACGAP1Q9H0H5 632 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ASB8Q9H765 288 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ZNF180Q9UJW8 692 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 IDO1P14902 403 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 RPA3P35244 121 aaPredicted RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 LIPMQ5VYY2 423 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 NATD1Q8N6N6 113 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 C4orf32Q8N8J7 132 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 CXorf40BQ96DE9 158 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 FAM192AQ9GZU8 254 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 TRPC4Q9UBN4 977 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms