RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EML3Q32P44 896 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 HSP90B2PQ58FF3 399 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CERCAMQ5T4B2 595 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CYP4X1Q8N118 509 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 OBP2AQ9NY56 170 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 GOLGA6AQ9NYA3 693 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CTNNAL1Q9UBT7 734 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 AP3B1O00203 1094 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 PGAM1P18669 254 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 PHBP35232 272 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 VIPR2P41587 438 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 NSUN2Q08J23 767 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF354CQ86Y25 554 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SMARCD2Q92925 531 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 BHMTQ93088 406 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 APOL2Q9BQE5 337 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 FAM159BA6NKW6 160 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 TBX10O75333 385 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CPP00450 1065 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 HOXB8P17481 243 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 LTBRP36941 435 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-204ENST00000396548 GAB4Q2WGN9 574 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 FUT11Q495W5 492 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 ARMC3Q5W041 872 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SH2D3CQ8N5H7 860 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 GSDMBQ8TAX9 411 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 MZB1Q8WU39 189 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 CFAP36Q96G28 342 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SEMA3CQ99985 751 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 KIFC1Q9BW19 673 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
TRIM39-204ENST00000396548 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 TMCC1O94876 653 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 MT-CO1P00395 513 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 CYBBP04839 570 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 LINGO4Q6UY18 593 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 TTC16Q8NEE8 873 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 IPMKQ8NFU5 416 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ACDQ96AP0 544 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 MSLNLQ96KJ4 702 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 NUDCD1Q96RS6 583 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 APOL5Q9BWW9 433 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 IL22Q9GZX6 179 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 NOD2Q9HC29 1040 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ABCB8Q9NUT2 735 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 VPS18Q9P253 973 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 PRKAG3Q9UGI9 489 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 SOX13Q9UN79 622 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 PMPCBO75439 489 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 CISD3P0C7P0 127 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 TYRP14679 529 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 GEMIN4P57678 1058 aaKnown RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF235Q14590 738 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
TRIM39-204ENST00000396548 RIBC1Q8N443 379 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 CINPQ9BW66 212 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 MRM3Q9HC36 420 aaKnown RBP12.88□□□□□ -0.35
TRIM39-204ENST00000396548 FAM237BA0A1B0GVD1 139 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 MAGEB16A2A368 324 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 USP1O94782 785 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 EPOP01588 193 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CYP17A1P05093 508 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 TPH1P17752 444 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CES1P23141 567 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 STX2P32856 288 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CRYMQ14894 314 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SLC1A5Q15758 541 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 KBTBD12Q3ZCT8 623 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 RANBP9Q96S59 729 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 EXOC1LA0A1B0GW35 172 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 INSIG1O15503 277 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms