RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 EFL1Q7Z2Z2 1120 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 TFAP2DQ7Z6R9 452 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 PASD1Q8IV76 773 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 TMEM35BQ8NCS4 154 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 WDR36Q8NI36 951 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 KLF6Q99612 283 aaPredicted RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 CRACR2AQ9BSW2 395 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 SPON2Q9BUD6 331 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 C1QTNF7Q9BXJ2 289 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 ZYG11BQ9C0D3 744 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 ATP13A1Q9HD20 1204 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 NYNRINQ9P2P1 1898 aaKnown RBP17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 SPTA1P02549 2419 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 MAST4O15021 2626 aa17.83■□□□□ 0.44
EXOSC3-202ENST00000396521 CDRT15L2A8MXV6 281 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 LMO7DNF2Z398 122 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 NEMP1O14524 444 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 ZNF821O75541 412 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 ZMPSTE24O75844 475 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 SLC9A1P19634 815 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 GABRB2P47870 512 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 DNA2P51530 1060 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 CCNHP51946 323 aaPredicted RBP17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 THOP1P52888 689 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 STX17P56962 302 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 EIF3IQ13347 325 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 PTPN20Q4JDL3 420 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 C3orf38Q5JPI3 329 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 ARCQ7LC44 396 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 CLEC14AQ86T13 490 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 SDR16C5Q8N3Y7 309 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 MSANTD4Q8NCY6 345 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 C18orf8Q96DM3 657 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 BOCQ9BWV1 1114 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 OSBPL1AQ9BXW6 950 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 MPP6Q9NZW5 540 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 PPARGC1AQ9UBK2 798 aaKnown RBP17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 ENTPD2Q9Y5L3 495 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 TENM4Q6N022 2769 aa17.82■□□□□ 0.44
EXOSC3-202ENST00000396521 PON1P27169 355 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 CDH5P33151 784 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 BLKP51451 505 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 RNASE9P60153 205 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 GNA12Q03113 381 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 FGL2Q14314 439 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 POLD3Q15054 466 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 ZNF805Q5CZA5 627 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 OTUD1Q5VV17 481 aaPredicted RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 ESRP1Q6NXG1 681 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 GUSBP11Q6P575 273 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 GJB7Q6PEY0 223 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 CCDC81Q6ZN84 652 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 OR7D4Q8NG98 312 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 LMX1AQ8TE12 382 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 SCG3Q8WXD2 468 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 ATXN7L3BQ96GX2 97 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 SLC13A1Q9BZW2 595 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 PDCL3Q9H2J4 239 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 RWDD2AQ9UIY3 292 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 HPCAL4Q9UM19 191 aa17.81■□□□□ 0.44
EXOSC3-202ENST00000396521 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 IGLON5A6NGN9 336 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 C16orf96A6NNT2 1141 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 RAD51BO15315 384 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 SRGAP2O75044 1071 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 ENDOD1O94919 500 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 POP4O95707 220 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 ANXA6P08133 673 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 ITGA2BP08514 1039 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 C6orf132Q5T0Z8 1188 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 LVRNQ6Q4G3 990 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 FAM71AQ8IYT1 594 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 TBCBQ99426 244 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 CLMPQ9H6B4 373 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 ANLNQ9NQW6 1124 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 ZNF212Q9UDV6 495 aa17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 APOBEC3BQ9UH17 382 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-202ENST00000396521 I6L893 689 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 FOXN3O00409 490 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 LSM8O95777 96 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 MYF5P13349 255 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 CLCN1P35523 988 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 SUOXP51687 545 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 SNRPD1P62314 119 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 ARF5P84085 180 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 NRG1Q02297 640 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 KCNC4Q03721 635 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 EIF2B5Q13144 721 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 SPIDRQ14159 915 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 DEFB133Q30KQ1 61 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 ARL13BQ3SXY8 428 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 FAM102AQ5T9C2 384 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 PARS2Q7L3T8 475 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 SLC47A2Q86VL8 602 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 FSTL5Q8N475 847 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 OR6C4Q8NGE1 309 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 CENPTQ96BT3 561 aa17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 LIN37Q96GY3 246 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-202ENST00000396521 PRR11Q96HE9 360 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms