RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TMPRSS4Q9NRS4 437 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 TMEM248Q9NWD8 314 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 DOLKQ9UPQ8 538 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 FADS3Q9Y5Q0 445 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 WASF2Q9Y6W5 498 aa16.65■□□□□ 0.26
DDR1-229ENST00000396342 FRYQ5TBA9 3013 aa16.64■□□□□ 0.26
DDR1-229ENST00000396342 CABIN1Q9Y6J0 2220 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 TRIM38O00635 465 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 CKMT1AP12532 417 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 EPHB2P29323 1055 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 SUOXP51687 545 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 RHOAP61586 193 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 UBXN1Q04323 297 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 PDE1CQ14123 709 aaPredicted RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 GRM3Q14832 879 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 KRT31Q15323 416 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 C15orf59Q2T9L4 293 aaPredicted RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 MYLK3Q32MK0 819 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 CCDC14Q49A88 953 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 TMEM259Q4ZIN3 620 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 ZCCHC8Q6NZY4 707 aaKnown RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 GDPD4Q6W3E5 623 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 PHLDB2Q86SQ0 1253 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 SLC25A45Q8N413 288 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 RFFLQ8WZ73 363 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 ARHGEF2Q92974 986 aaKnown RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 LENG8Q96PV6 779 aaPredicted RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 UBL7Q96S82 380 aaPredicted RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 SPASTQ9UBP0 616 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 ZFR2Q9UPR6 939 aaKnown RBP16.64■□□□□ 0.25
DDR1-229ENST00000396342 CSNK1G3Q9Y6M4 447 aa16.64■□□□□ 0.25
DDR1-229ENST00000396342 SPTY2D1-AS1A0A0U1RR47 76 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 IGLON5A6NGN9 336 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 C2CD4BA6NLJ0 364 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 TOR1BO14657 336 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 KDELR3O43731 214 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ZMPSTE24O75844 475 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 CYP1A1P04798 512 aaPredicted RBP16.63■□□□□ 0.25
DDR1-229ENST00000396342 UGT2B4P06133 528 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 BLKP51451 505 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 AIF1P55008 147 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ARF5P84085 180 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ELP6Q0PNE2 266 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ERAP2Q6P179 960 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 GCNT7Q6ZNI0 430 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 PARS2Q7L3T8 475 aaKnown RBP16.63■□□□□ 0.25
DDR1-229ENST00000396342 KANSL1Q7Z3B3 1105 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 DCBLD1Q8N8Z6 715 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ATL2Q8NHH9 583 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 ASB12Q8WXK4 309 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 NTAN1Q96AB6 310 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 GRAMD1AQ96CP6 724 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 LGMNQ99538 433 aa16.63■□□□□ 0.25
DDR1-229ENST00000396342 NAT10Q9H0A0 1025 aaKnown RBP16.63■□□□□ 0.25
DDR1-229ENST00000396342 NOCTQ9UK39 431 aaKnown RBP16.63■□□□□ 0.25
DDR1-229ENST00000396342 CPED1A4D0V7 1026 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 DAPK3O43293 454 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 AQP9O43315 295 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 CREB3O43889 395 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 OPA1O60313 960 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 TM7SF2O76062 418 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 LRIG2O94898 1065 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 CSF2P04141 144 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 ANXA6P08133 673 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 NME1P15531 152 aaKnown RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 JUNDP17535 347 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 HTR1BP28222 390 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 RBMS1P29558 406 aaKnown RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 ACVRL1P37023 503 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 EIF2S3P41091 472 aaKnown RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 CLDN6P56747 220 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 YBEYP58557 167 aaPredicted RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 INSM1Q01101 510 aaPredicted RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 FMO1Q01740 532 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 PARP15Q460N3 678 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 ZNF542PQ5EBM4 170 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 FAXCQ5TGI0 409 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 ESRP1Q6NXG1 681 aaKnown RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 FAM181AQ8N9Y4 354 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 C3orf20Q8ND61 904 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 OR6K2Q8NGY2 324 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 WDR48Q8TAF3 677 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 LMX1AQ8TE12 382 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 APOLD1Q96LR9 279 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 KLHL32Q96NJ5 620 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 C1QTNF2Q9BXJ5 285 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 GANQ9H2C0 597 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 UCKL1Q9NWZ5 548 aa16.62■□□□□ 0.25
DDR1-229ENST00000396342 ANKRD11Q6UB99 2663 aaPredicted RBP16.62■□□□□ 0.25
DDR1-229ENST00000396342 TMEM110-MUSTN1A8MSY1 372 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 I6L893 689 aaPredicted RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 K7ESM1 405 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 FGF10O15520 208 aaPredicted RBP16.61■□□□□ 0.25
DDR1-229ENST00000396342 BRINP1O60477 761 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 HTR7P34969 479 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 UCNP55089 124 aa16.61■□□□□ 0.25
DDR1-229ENST00000396342 PCBP4P57723 403 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms