RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF549Q6P9A3 640 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 AFTPHQ6ULP2 937 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 EIF3MQ7L2H7 374 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CACTIN-AS1Q8N1I8 211 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 AENQ8WTP8 325 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RERGQ96A58 199 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CEP41Q9BYV8 373 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MATKP42679 507 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 FKBP1BP68106 108 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 POTEHQ6S545 545 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NET1Q7Z628 596 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ALLCQ8N6M5 410 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CXorf40AQ8TE69 158 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF558Q96NG5 402 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 REXO4Q9GZR2 422 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RACGAP1Q9H0H5 632 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ROBO3Q96MS0 1386 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 F8VP50 259 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MAFO75444 373 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SLC25A12O75746 678 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RCVRNP35243 200 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RTP1P59025 263 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MRPS6P82932 125 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 GATAD2AQ86YP4 633 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PPP3R2Q96LZ3 170 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ULBP1Q9BZM6 244 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ATP6V1HQ9UI12 483 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 GIT1Q9Y2X7 761 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 STON1Q9Y6Q2 735 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 AKAP12Q02952 1782 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 FCHO1O14526 889 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 BIRC5O15392 142 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 OR6B1O95007 311 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 TSPAN19P0C672 248 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 IDO1P14902 403 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 BMP7P18075 431 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 HTR1BP28222 390 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CD86P42081 329 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 FAM46CQ5VWP2 391 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZDHHC20Q5W0Z9 365 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 AGMOQ6ZNB7 445 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 BNIPLQ7Z465 357 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 BEND7Q8N7W2 519 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 RP9Q8TA86 221 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MTFMTQ96DP5 389 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZDHHC6Q9H6R6 413 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 FBXL21Q9UKT6 434 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MTF2Q9Y483 593 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CLOCKO15516 846 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PSMD10O75832 226 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 UMPSP11172 480 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 COX7A2P14406 83 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PSMB4P28070 264 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 USP41Q3LFD5 358 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 BRMS1LQ5PSV4 323 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 DCLRE1AQ6PJP8 1040 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 STRADAQ7RTN6 431 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PHC3Q8NDX5 983 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PPTC7Q8NI37 304 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SLC38A2Q96QD8 506 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 P2RX7Q99572 595 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SRRM3A6NNA2 597 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PTGES3LE9PB15 166 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MRASO14807 208 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 AVILO75366 819 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 OTCP00480 354 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 HDCP19113 662 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PLK1P53350 603 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SLC25A52Q3SY17 297 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NOMO2Q5JPE7 1267 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 EARS2Q5JPH6 523 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF276Q8N554 614 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZSWIM2Q8NEG5 633 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NMD3Q96D46 503 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZBTB45Q96K62 511 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NUAK2Q9H093 628 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SLC27A6Q9Y2P4 619 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CYP1A2P05177 515 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF618Q5T7W0 954 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ARMC3Q5W041 872 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 TRIM40Q6P9F5 258 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 SH3RF1Q7Z6J0 888 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PROSER1Q86XN7 944 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 C8orf59Q8N0T1 100 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 DEPDC4Q8N2C3 294 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 FNIP1Q8TF40 1166 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CKAP2Q8WWK9 683 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ELMO1Q92556 727 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 CLN6Q9NWW5 311 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ANAPC2Q9UJX6 822 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 POLR1DQ9Y2S0 133 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 A0A1W2PQ67 120 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 EML1O00423 815 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PLSCR1O15162 318 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 PARNO95453 639 aaKnown RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ASGR1P07306 291 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ADH1AP07327 375 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 ATP5F1P24539 256 aaPredicted RBP5.51□□□□□ -1.53
VPS13C-204ENST00000395898 MAPKAPK2P49137 400 aa5.51□□□□□ -1.53
VPS13C-204ENST00000395898 NUMBP49757 651 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms