RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ATP6V0D2Q8N8Y2 350 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 OR6P1Q8NGX9 317 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 BHMTQ93088 406 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 TSEN34Q9BSV6 310 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 MKS1Q9NXB0 559 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 KCTD3Q9Y597 815 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 A0A0D9SEW6 157 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 SNNO75324 88 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 SKIV2L2P42285 1042 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 ZNF789Q5FWF6 425 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 TIGD7Q6NT04 549 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 WDR75Q8IWA0 830 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 FAM13CQ8NE31 585 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 PIWIL2Q8TC59 973 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 PPP4R1Q8TF05 950 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 TTPALQ9BTX7 342 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 KIFC1Q9BW19 673 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 NMRAL1Q9HBL8 299 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 CDH23Q9H251 3354 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 SLC2A3P11169 496 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 PTPN4P29074 926 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 ALDH7A1P49419 539 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 ACCSLQ4AC99 568 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 ZC3HC1Q86WB0 502 aaKnown RBP18.12■□□□□ 0.49
SREBF1-204ENST00000395756 LGI2Q8N0V4 545 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 SLC43A3Q8NBI5 491 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 TTC8Q8TAM2 541 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 EXOC2Q96KP1 924 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 BTN2A3PQ96KV6 586 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 KCNK4Q9NYG8 393 aa18.12■□□□□ 0.49
SREBF1-204ENST00000395756 OR51F1A6NGY5 319 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 PRR5-ARHGAP8B1AHC4 643 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 RAMP2O60895 175 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 GJB5O95377 273 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 ATF6P18850 670 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 HOXC13P31276 330 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 RENBPP51606 427 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 MXRA7P84157 204 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 ARHGAP8P85298 464 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 GPR17Q13304 367 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 PDPK2PQ6A1A2 396 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 CEP97Q8IW35 865 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 POU5F2Q8N7G0 328 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 FBXO22Q8NEZ5 403 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 CADM1Q9BY67 442 aaKnown RBP18.11■□□□□ 0.49
SREBF1-204ENST00000395756 UXTQ9UBK9 157 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-204ENST00000395756 B2RBV5 119 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 TIMM44O43615 452 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 NCF2P19878 526 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-204ENST00000395756 FGFR3P22607 806 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 PAX3P23760 479 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 ARNTP27540 789 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 SLC1A2P43004 574 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 MCUR1Q96AQ8 359 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 WWP1Q9H0M0 922 aa18.11■□□□□ 0.49
SREBF1-204ENST00000395756 SUDS3Q9H7L9 328 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-204ENST00000395756 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.11■□□□□ 0.49
SREBF1-204ENST00000395756 OR6C75A6NL08 312 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 TSPAN3O60637 253 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 HSPA4LO95757 839 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 SERPINE1P05121 402 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 DNAJB2P25686 324 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 CA8P35219 290 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 VEGFBP49765 207 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 NAB1Q13506 487 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 MRPL58Q14197 206 aaKnown RBP18.1■□□□□ 0.49
SREBF1-204ENST00000395756 ANO4Q32M45 955 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 ARHGAP18Q8N392 663 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 C1orf74Q96LT6 269 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 FNDC3AQ9Y2H6 1198 aaKnown RBP18.1■□□□□ 0.49
SREBF1-204ENST00000395756 PEX11BO96011 259 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 RHOQP17081 205 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 RPS24P62847 133 aaKnown RBP18.1■□□□□ 0.49
SREBF1-204ENST00000395756 NADSYN1Q6IA69 706 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 CNSTQ6PJW8 725 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 RANBP10Q6VN20 620 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 DENND1CQ8IV53 801 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 ZNF781Q8N8C0 355 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 NSMCE1Q8WV22 266 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 RNF208Q9H0X6 261 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 HIPK3Q9H422 1215 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 ENTPD7Q9NQZ7 604 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 SMPD4Q9NXE4 827 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 TAS2R1Q9NYW7 299 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 TCAF1Q9Y4C2 921 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 THSD7BQ9C0I4 1608 aa18.1■□□□□ 0.49
SREBF1-204ENST00000395756 GOLGA8QA0A0J9YX86 632 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 LOC100653049A0A140TA62 436 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 GOLGA8OA6NCC3 632 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 MEI4A8MW99 385 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 GOLGA8NF8WBI6 632 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 CCDC22O60826 627 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 KRT34O76011 436 aa18.09■□□□□ 0.49
SREBF1-204ENST00000395756 CHRNGP07510 517 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms