RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CYTH1Q15438 398 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 INAVAQ3KP66 663 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 RETSATQ6NUM9 610 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SCYL2Q6P3W7 929 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 TMPRSS7Q7RTY8 843 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 ADAT2Q7Z6V5 191 aaKnown RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 HORMAD1Q86X24 394 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 ARHGAP12Q8IWW6 846 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SLC22A18ASQ8N1D0 253 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 SLC25A45Q8N413 288 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 ANKRD20A12PQ8NF67 263 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 OR13H1Q8NG92 308 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 MDM1Q8TC05 714 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 TSC1Q92574 1164 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 FUBP1Q96AE4 644 aaKnown RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 ISG20Q96AZ6 181 aaKnown RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 KCTD15Q96SI1 283 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 MAGEH1Q9H213 219 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 LRRC19Q9H756 370 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 PDFQ9HBH1 243 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 PREBQ9HCU5 417 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 GPR27Q9NS67 375 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 TMEM51Q9NW97 253 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 UCKL1Q9NWZ5 548 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 HECAQ9UBI9 543 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 DKK4Q9UBT3 224 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 PNMA8BQ9ULN7 279 aaPredicted RBP9.01□□□□□ -0.97
ATG4A-205ENST00000394892 MFHAS1Q9Y4C4 1052 aa9.01□□□□□ -0.97
ATG4A-205ENST00000394892 FAM149AA5PLN7 773 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 POM121BA6NF01 834 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 C16orf96A6NNT2 1141 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 RASA4BC9J798 803 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 J3KR12 359 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 AREL1O15033 823 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 RASA4O43374 803 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TNFSF14O43557 240 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 CREB3O43889 395 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 RAMP2O60895 175 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 SDC3O75056 442 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TMCC1O94876 653 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 FTLP02792 175 aaPredicted RBP9□□□□□ -0.97
ATG4A-205ENST00000394892 ADRB3P13945 408 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TIMP2P16035 220 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TNFAIP3P21580 790 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ITGB7P26010 798 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 EPHB2P29323 1055 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 GRK6P43250 576 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 RGRP47804 291 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 SERINC3Q13530 473 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 POLD3Q15054 466 aaPredicted RBP9□□□□□ -0.97
ATG4A-205ENST00000394892 MYLK3Q32MK0 819 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ARL13BQ3SXY8 428 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 LRRC73Q5JTD7 316 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 AFMIDQ63HM1 303 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TXNRD3NBQ6F5E7 133 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ARHGAP36Q6ZRI8 547 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 TMC6Q7Z403 805 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ABI3BPQ7Z7G0 1075 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 PRPF39Q86UA1 669 aaKnown RBP9□□□□□ -0.97
ATG4A-205ENST00000394892 IQCHQ86VS3 1027 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ZSWIM9Q86XI8 627 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 CPNE8Q86YQ8 564 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 UMODL1-AS1Q8N2C9 162 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 EID2Q8N6I1 236 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 NPWQ8N729 165 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
ATG4A-205ENST00000394892 VCPIP1Q96JH7 1222 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 SNRNP25Q9BV90 132 aaKnown RBP9□□□□□ -0.97
ATG4A-205ENST00000394892 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ZDHHC6Q9H6R6 413 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ERVMER34-1Q9H9K5 563 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 GDF3Q9NR23 364 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 KLF15Q9UIH9 416 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 NENFQ9UMX5 172 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 DMTF1Q9Y222 760 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 PLXNA2O75051 1894 aa9□□□□□ -0.97
ATG4A-205ENST00000394892 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 LY6G6EA0A0G2JKS1 128 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 CXorf51AA0A1B0GTR3 108 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 TRABD2BA6NFA1 517 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 IGLON5A6NGN9 336 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 SMTNL1A8MU46 457 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 PRAMEF26H0Y7S4 382 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 MUSKO15146 869 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 AP1G1O43747 822 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 DFNA5O60443 496 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 BUB1BO60566 1050 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 LRCH4O75427 683 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 PCDH8O95206 1070 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 PAK4O96013 591 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-205ENST00000394892 GSRP00390 522 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 UGT2B4P06133 528 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 THEGLP0DJG4 465 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 GZMAP12544 262 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 MYF5P13349 255 aa8.99□□□□□ -0.97
ATG4A-205ENST00000394892 MIPP30301 263 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms