RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SKA1Q96BD8 255 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 GDAP1L1Q96MZ0 367 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 PACSIN1Q9BY11 444 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 TM7SF3Q9NS93 570 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 CTTNBP2NLQ9P2B4 639 aa31.24■■■□□ 2.59
CMTM4-202ENST00000394106 UBA2Q9UBT2 640 aaPredicted RBP31.24■■■□□ 2.59
CMTM4-202ENST00000394106 TP53BP1Q12888 1972 aaPredicted RBP31.24■■■□□ 2.59
CMTM4-202ENST00000394106 NCOR2Q9Y618 2525 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 A0A1W2PQU0 124 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 ARHGAP42A6NI28 874 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 H3BRJ5 948 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 AKR1B10O60218 316 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 SH3BP5O60239 455 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 PCDH8O95206 1070 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 POP4O95707 220 aaKnown RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 HCAR3P49019 387 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 PAPOLAP51003 745 aaKnown RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 ZNF135P52742 658 aaPredicted RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 MAPK8IP2Q13387 824 aaPredicted RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 SETMARQ53H47 684 aaPredicted RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 INO80DQ53TQ3 878 aaPredicted RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 NAPEPLDQ6IQ20 393 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 CTNNBL1Q8WYA6 563 aaPredicted RBP31.23■■■□□ 2.59
CMTM4-202ENST00000394106 KLK6Q92876 244 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 CAMK1GQ96NX5 476 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 TRIM5Q9C035 493 aa31.23■■■□□ 2.59
CMTM4-202ENST00000394106 SSU72P8A0A1W2PR75 194 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 J3KR12 359 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 DFFAO00273 331 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 IGSF6O95976 241 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 RARAP10276 462 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 ADRB3P13945 408 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 ARL4AP40617 200 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 CTSKP43235 329 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 DPYSQ14117 519 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 DPYSL2Q16555 572 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 ASTE1Q2TB18 679 aaPredicted RBP31.22■■■□□ 2.59
CMTM4-202ENST00000394106 SLC45A4Q5BKX6 768 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 TXNRD3NBQ6F5E7 133 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 PARS2Q7L3T8 475 aaKnown RBP31.22■■■□□ 2.59
CMTM4-202ENST00000394106 NAXDQ8IW45 347 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 NPWQ8N729 165 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 LRIG1Q96JA1 1093 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 DMTF1Q9Y222 760 aa31.22■■■□□ 2.59
CMTM4-202ENST00000394106 DOCK9Q9BZ29 2069 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 UGT2B4P06133 528 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 ZNF883P0CG24 379 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 NUDT1P36639 197 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 NEK5Q6P3R8 708 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 EXOC2Q96KP1 924 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 CHP1Q99653 195 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 PDFQ9HBH1 243 aa31.21■■■□□ 2.59
CMTM4-202ENST00000394106 SPAARA0A1B0GVQ0 90 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 A0A1W2PR77 199 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 H0Y8X5 98 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 PRAMEF11O60813 436 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 H2AFZP0C0S5 128 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 PRLRP16471 622 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 SLC25A11Q02978 314 aaKnown RBP31.2■■■□□ 2.59
CMTM4-202ENST00000394106 RAD51Q06609 339 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 CYTH1Q15438 398 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 ZNF805Q5CZA5 627 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 AFMIDQ63HM1 303 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 SARM1Q6SZW1 724 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 H2AFVQ71UI9 128 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 HORMAD1Q86X24 394 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 ARHGAP12Q8IWW6 846 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 SETD7Q8WTS6 366 aaKnown RBP31.2■■■□□ 2.59
CMTM4-202ENST00000394106 TEKT4Q8WW24 435 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 KLHL32Q96NJ5 620 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 OSBPL1AQ9BXW6 950 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 LHX3Q9UBR4 397 aa31.2■■■□□ 2.59
CMTM4-202ENST00000394106 C16orf96A6NNT2 1141 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 SLC31A1O15431 190 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 POLNQ7Z5Q5 900 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 CNGA4Q8IV77 575 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 CCDC42Q96M95 316 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 MYOCQ99972 504 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 NHEJ1Q9H9Q4 299 aaPredicted RBP31.19■■■□□ 2.58
CMTM4-202ENST00000394106 SP110Q9HB58 689 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 SPTLC3Q9NUV7 552 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 UVRAGQ9P2Y5 699 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 CA5BQ9Y2D0 317 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 MFHAS1Q9Y4C4 1052 aa31.19■■■□□ 2.58
CMTM4-202ENST00000394106 AKR1B15C9JRZ8 316 aaPredicted RBP31.18■■■□□ 2.58
CMTM4-202ENST00000394106 PRAMEF26H0Y7S4 382 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 AMPD1P23109 780 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 GJC1P36383 396 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 SIM1P81133 766 aaPredicted RBP31.18■■■□□ 2.58
CMTM4-202ENST00000394106 IL9RQ01113 521 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 KRT81Q14533 505 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 STAT4Q14765 748 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 ZNF423Q2M1K9 1284 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 ZNF284Q2VY69 593 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 PRAMEF14Q5SWL7 426 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 SEL1L3Q68CR1 1132 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 GDPD4Q6W3E5 623 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 CSPG4P5Q96PW8 444 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 PCDH18Q9HCL0 1135 aa31.18■■■□□ 2.58
CMTM4-202ENST00000394106 ZFR2Q9UPR6 939 aaKnown RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms