RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KRT7P08729 469 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF883P0CG24 379 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 METAP1P53582 386 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 KRT81Q14533 505 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 RFTN1Q14699 578 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 NAPEPLDQ6IQ20 393 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
GGPS1-203ENST00000391855 TC2NQ8N9U0 490 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 FAM71BQ8TC56 605 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 BTBD6Q96KE9 485 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF599Q96NL3 588 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 CSPG4P5Q96PW8 444 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 PACSIN1Q9BY11 444 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 SLC39A8Q9C0K1 460 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 ZDHHC6Q9H6R6 413 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 PCDH18Q9HCL0 1135 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 MFHAS1Q9Y4C4 1052 aa12.88□□□□□ -0.35
GGPS1-203ENST00000391855 AP1G1O43747 822 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 MAGEC1O60732 1142 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 RNGTTO60942 597 aaKnown RBP12.87□□□□□ -0.35
GGPS1-203ENST00000391855 ADRB3P13945 408 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 TCF4P15884 667 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 PAPOLAP51003 745 aaKnown RBP12.87□□□□□ -0.35
GGPS1-203ENST00000391855 CDH6P55285 790 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 PPP2CBP62714 309 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 PPP2CAP67775 309 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 IL10RBQ08334 325 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
GGPS1-203ENST00000391855 PDK2Q15119 407 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 MYLK3Q32MK0 819 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 UAP1L1Q3KQV9 507 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF805Q5CZA5 627 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 MAP7D3Q8IWC1 876 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 ARHGAP12Q8IWW6 846 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 CCDC170Q8IYT3 715 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 NPWQ8N729 165 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 TSC1Q92574 1164 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
GGPS1-203ENST00000391855 ZNF670Q9BS34 389 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 CACNA1EQ15878 2313 aa12.87□□□□□ -0.35
GGPS1-203ENST00000391855 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 DFFAO00273 331 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PLK4O00444 970 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 KRIT1O00522 736 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 VILLO15195 856 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 DFNA5O60443 496 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 CD38P28907 300 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 CYLC1P35663 651 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-203ENST00000391855 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
GGPS1-203ENST00000391855 SUOXP51687 545 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 C21orf59P57076 290 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 TAS2R38P59533 333 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 OVGP1Q12889 678 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PPM1JQ5JR12 505 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 TXNRD3NBQ6F5E7 133 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 KIAA1161Q6NSJ0 714 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 GDPD4Q6W3E5 623 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PARS2Q7L3T8 475 aaKnown RBP12.86□□□□□ -0.35
GGPS1-203ENST00000391855 IQCHQ86VS3 1027 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 LRRC49Q8IUZ0 686 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 SERAC1Q96JX3 654 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PANX2Q96RD6 677 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 CPEB1Q9BZB8 566 aaKnown RBP12.86□□□□□ -0.35
GGPS1-203ENST00000391855 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 AASDHPPTQ9NRN7 309 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 DKK3Q9UBP4 350 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 LHX3Q9UBR4 397 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 IPO11Q9UI26 975 aaKnown RBP12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 FRYLO94915 3013 aa12.86□□□□□ -0.35
GGPS1-203ENST00000391855 PRAMEF26H0Y7S4 382 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 J3KR12 359 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 YKT6O15498 198 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 TSPAN6O43657 245 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 GJB3O75712 270 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 UGT2B4P06133 528 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 CEACAM1P13688 526 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 AMPD1P23109 780 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 SLC1A1P43005 524 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 CSNK1DP48730 415 aa12.85□□□□□ -0.35
GGPS1-203ENST00000391855 CSNK1EP49674 416 aaKnown RBP12.85□□□□□ -0.35
GGPS1-203ENST00000391855 RENBPP51606 427 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms