RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 NIPA2Q8N8Q9 360 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TRPC4APQ8TEL6 797 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 RBBP8Q99708 897 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TBCDQ9BTW9 1192 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TK2O00142 265 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 FBXO47Q5MNV8 452 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 ITFG1Q8TB96 612 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 OMA1Q96E52 524 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TELO2Q9Y4R8 837 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 ATRNL1Q5VV63 1379 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 SNAP91O60641 907 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 CLASP2O75122 1294 aaKnown RBP14.41□□□□□ -0.1
RTF1-201ENST00000389629 AOC1P19801 751 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 STT3AP46977 705 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 CA9Q16790 459 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 METTL21CQ5VZV1 264 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 SLC10A4Q96EP9 437 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 CSPG4P5Q96PW8 444 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 AP5M1Q9H0R1 490 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 RIBC2Q9H4K1 309 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 POPDC2Q9HBU9 364 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 PCDH12Q9NPG4 1184 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 MTF2Q9Y483 593 aaPredicted RBP14.41□□□□□ -0.1
RTF1-201ENST00000389629 MYL3P08590 195 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 CDH13P55290 713 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 SQLEQ14534 574 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 NOTUMQ6P988 496 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 SLCO6A1Q86UG4 719 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 RBM12BQ8IXT5 1001 aaKnown RBP14.41□□□□□ -0.1
RTF1-201ENST00000389629 ATG16L2Q8NAA4 619 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TAMM41Q96BW9 452 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 ALG9Q9H6U8 611 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
RTF1-201ENST00000389629 A0A088AWK7 358 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 TSPAN3O60637 253 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 NFKB1P19838 968 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CHRM3P20309 590 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 YAP1P46937 504 aaKnown RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 SEPHS1P49903 392 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 SLC25A11Q02978 314 aaKnown RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 ARMC4Q5T2S8 1044 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CERCAMQ5T4B2 595 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 PRMT9Q6P2P2 845 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CMASQ8NFW8 434 aaPredicted RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 C10orf71Q711Q0 1435 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 LOC100506127A0A0U1RQW1 187 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CCDC154A6NI56 674 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 GRIN3BO60391 1043 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 NRP2O60462 931 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FAM20BO75063 409 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 AKAP5P24588 427 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 KCNJ11Q14654 390 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 INSCQ1MX18 579 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CMPK2Q5EBM0 449 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 ZNF276Q8N554 614 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 COMMD8Q9NX08 183 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 PKD1L3Q7Z443 1732 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 A0A0J9YVX5 310 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 TMEM247A6NEH6 219 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CILPO75339 1184 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 SORBS2O94875 1100 aaKnown RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 PENKP01210 267 aaPredicted RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 TNFAIP8L3Q5GJ75 292 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 SPESP1Q6UW49 350 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 SCIMPQ6UWF3 145 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 KCTD8Q6ZWB6 473 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 EFHBQ8N7U6 833 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FANCEQ9HB96 536 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 PDLIM1O00151 329 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 NCAM2O15394 837 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 CCNT2O60583 730 aaKnown RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 DNAJA2O60884 412 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 TADA2AO75478 443 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 ZNF846Q147U1 533 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 TMEM132BQ14DG7 1078 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 DCAF4L1Q3SXM0 396 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FAM126BQ8IXS8 530 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 C1orf127Q8N9H9 656 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FNDC5Q8NAU1 212 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 REPS2Q8NFH8 660 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 FAM193BQ96PV7 902 aaPredicted RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 PNMA8BQ9ULN7 279 aaPredicted RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 PHF24Q9UPV7 400 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 TNFSF13BQ9Y275 285 aa14.4□□□□□ -0.1
RTF1-201ENST00000389629 GPC6Q9Y625 555 aaPredicted RBP14.4□□□□□ -0.1
RTF1-201ENST00000389629 ARL2P36404 184 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 TRAF3Q13114 568 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 GRM1Q13255 1194 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 CRTC3Q6UUV7 619 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 SLC22A9Q8IVM8 553 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 C1orf21Q9H246 121 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 CATSPERBQ9H7T0 1116 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 RBM22Q9NW64 420 aaKnown RBP eCLIP14.39□□□□□ -0.11
RTF1-201ENST00000389629 PCDHB12Q9Y5F1 795 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 C2CD4BA6NLJ0 364 aa14.39□□□□□ -0.11
RTF1-201ENST00000389629 PDZK1P1A8MUH7 402 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms