RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZMIZ2Q8NF64 920 aa16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 SGF29Q96ES7 293 aa16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 LRGUKQ96M69 825 aa16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 PRICKLE1Q96MT3 831 aaPredicted RBP16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 NPY6RQ99463 290 aa16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 LZTS1Q9Y250 596 aa16.49■□□□□ 0.23
NKX3-1-201ENST00000380871 TMEM114B3SHH9 223 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RPL14P50914 215 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 MYBPC1Q00872 1141 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PAFAH1B3Q15102 231 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 NADK2Q4G0N4 442 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 SLC41A1Q8IVJ1 513 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 LSMEM2Q8N112 164 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PNPLA1Q8N8W4 532 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 B4GALNT2Q8NHY0 566 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PIP4K2CQ8TBX8 421 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 BTBD9Q96Q07 612 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 VCX3AQ9NNX9 186 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 ADAM28Q9UKQ2 775 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 TRPV2Q9Y5S1 764 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PEX1O43933 1283 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 DAB1O75553 588 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 GABRB3P28472 473 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RPL34P49207 117 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 FKBP1BP68106 108 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 ADGRE1Q14246 886 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 ZNF280DQ6N043 979 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RPS27LQ71UM5 84 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RASAL3Q86YV0 1011 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 DENND6AQ8IWF6 608 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 C1QTNF1Q9BXJ1 281 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 TKTL2Q9H0I9 626 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 WDR41Q9HAD4 459 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 CASS4Q9NQ75 786 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RCOR3Q9P2K3 495 aaPredicted RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 NELFEP18615 380 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 KCTD11Q693B1 232 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 OTOP3Q7RTS5 596 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 ARHGAP22Q7Z5H3 698 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 CCNYL1Q8N7R7 359 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 EZH1Q92800 747 aaPredicted RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PRPF18Q99633 342 aaKnown RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 C6orf203Q9P0P8 240 aaPredicted RBP16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 PADI3Q9ULW8 664 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
NKX3-1-201ENST00000380871 CLPTM1O96005 669 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MPOP05164 745 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 ITGB1P05556 798 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 SLC35E2BP0CK96 405 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 ELNP15502 786 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 HDCP19113 662 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 PPARGP37231 505 aaPredicted RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 INHBCP55103 352 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 DAOAP59103 153 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 USP10Q14694 798 aaKnown RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MFSD6LQ8IWD5 586 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 FSTL5Q8N475 847 aaPredicted RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MARVELD2Q8N4S9 558 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 ADAM2Q99965 735 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 FTHL17Q9BXU8 183 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 DRC3Q9H069 523 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 WDCPQ9H6R7 721 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 DDX18Q9NVP1 670 aaKnown RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 RUVBL2Q9Y230 463 aaKnown RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 SLC4A7Q9Y6M7 1214 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 DFFAO00273 331 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MGEA5O60502 916 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 JCHAINP01591 159 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MPP1Q00013 466 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 CTBP1Q13363 440 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 LIPMQ5VYY2 423 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 SPATA22Q8NHS9 363 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 MCMBPQ9BTE3 642 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 SEMA6AQ9H2E6 1030 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 XPR1Q9UBH6 696 aa16.47■□□□□ 0.23
NKX3-1-201ENST00000380871 NEMP2A6NFY4 417 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 MYCP01106 439 aaPredicted RBP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 FLT3LGP49771 235 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 NSUN2Q08J23 767 aaKnown RBP eCLIP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 RARS2Q5T160 578 aaKnown RBP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 TAF2Q6P1X5 1199 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 C16orf89Q6UX73 402 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 ZYG11AQ6WRX3 759 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 ZC3HC1Q86WB0 502 aaKnown RBP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 CEP97Q8IW35 865 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 TMLHEQ9NVH6 421 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 COPG1Q9Y678 874 aaKnown RBP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 MSI1O43347 362 aaKnown RBP16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 TRPA1O75762 1119 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 FGFR3P22607 806 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 NRF1Q16656 503 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 GK5Q6ZS86 529 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
NKX3-1-201ENST00000380871 PCDH20Q8N6Y1 951 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms