RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 COL6A2P12110 1019 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PPARGP37231 505 aaPredicted RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 SLC1A2P43004 574 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 TAS2R39P59534 338 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 RAB10P61026 200 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CNGA3Q16281 694 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 FBXL19Q6PCT2 694 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 LCA5Q86VQ0 697 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 RCN3Q96D15 328 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CATSPER2Q96P56 530 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CDRT15Q96T59 188 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PKMYT1Q99640 499 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 FICDQ9BVA6 458 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 SLC39A8Q9C0K1 460 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 GLOD4Q9HC38 313 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PRPF19Q9UMS4 504 aaKnown RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 FAM95CA0A1B0GW59 222 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PSMD3O43242 534 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 XRCC1P18887 633 aaPredicted RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 PCSK1P29120 753 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CHRNA4P43681 627 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 PAPOLAP51003 745 aaKnown RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 PRKAA2P54646 552 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 MRPS6P82932 125 aaKnown RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 MS4A2Q01362 244 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CEACAM7Q14002 265 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 OGFRL1Q5TC84 451 aaPredicted RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 MANEALQ5VSG8 457 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 CD300LGQ6UXG3 332 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 ATPAF2Q8N5M1 289 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 TXNDC5Q8NBS9 432 aaKnown RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 ATXN3LQ9H3M9 355 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 SUDS3Q9H7L9 328 aaPredicted RBP11.07□□□□□ -0.64
BEST1-201ENST00000378043 ZBTB26Q9HCK0 441 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 TREX1Q9NSU2 369 aa11.07□□□□□ -0.64
BEST1-201ENST00000378043 TDRD15B5MCY1 1934 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 MYADML2A6NDP7 307 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 NEMP2A6NFY4 417 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 STX16-NPEPL1H3BU86 382 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 IRAK2O43187 625 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 MSI1O43347 362 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 PEX1O43933 1283 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PAGE1O75459 146 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 HLA-DQB2P05538 268 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 STMN1P16949 149 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 HOXC13P31276 330 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 BRCC3P46736 316 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 HK2P52789 917 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 COG7P83436 770 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 XIAPP98170 497 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 MED21Q13503 144 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 IRF5Q13568 498 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CYLC2Q14093 348 aaPredicted RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 PDCD2Q16342 344 aaPredicted RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 RANBP10Q6VN20 620 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 EP400NLQ6ZTU2 488 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 GALNT15Q8N3T1 639 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 OR10T2Q8NGX3 314 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 STON2Q8WXE9 905 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 FAM192AQ9GZU8 254 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PSMD13Q9UNM6 376 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 INPP5FQ9Y2H2 1132 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 TCAF1Q9Y4C2 921 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 DOCK4Q8N1I0 1966 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 TCAF2A6NFQ2 919 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CAPN8A6NHC0 703 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 MATN3O15232 486 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 SLC22A2O15244 555 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PMPCBO75439 489 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 ANXA9O76027 345 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CHRNA1P02708 482 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 DNAJB1P25685 340 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 GRIA2P42262 883 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 PKNOX1P55347 436 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 GRM2Q14416 872 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 FSCN1Q16658 493 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 UGP2Q16851 508 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 TAF2Q6P1X5 1199 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 KDELC2Q7Z4H8 507 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 SCML4Q8N228 414 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 C2CD4AQ8NCU7 369 aaPredicted RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 MAELQ96JY0 434 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 ACBD6Q9BR61 282 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CCDC28BQ9BUN5 200 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 VCX3BQ9H321 246 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 VPS28Q9UK41 221 aa11.06□□□□□ -0.64
BEST1-201ENST00000378043 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms