RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 ATRNL1Q5VV63 1379 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 SMIM28A0A1B0GU29 152 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 H3BMM5 538 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 PAPSS1O43252 624 aaPredicted RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 PQBP1O60828 265 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 MMP3P08254 477 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 UBAP2LQ14157 1087 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 RNASEH2BQ5TBB1 312 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 DCLRE1AQ6PJP8 1040 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 C10orf107Q8IVU9 208 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 RP9Q8TA86 221 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 RSPH1Q8WYR4 309 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 OPTCQ9UBM4 332 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 LGALS13Q9UHV8 139 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 NR2E1Q9Y466 385 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 IFRD1O00458 451 aaPredicted RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 TFEBP19484 476 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 WEE1P30291 646 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 NAA20P61599 178 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 SPIRE1Q08AE8 756 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 ATG16L2Q8NAA4 619 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 APOBEC3GQ9HC16 384 aaKnown RBP18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 DNMT3LQ9UJW3 386 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 TMCO1Q9UM00 188 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 PLLPQ9Y342 182 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 PGK1P00558 417 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 ADRA1BP35368 520 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 SLC35G1Q2M3R5 365 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 RNF145Q96MT1 663 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 ZMYM5Q9UJ78 669 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 FBXO5Q9UKT4 447 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 MYRFQ9Y2G1 1151 aa18.9■□□□□ 0.62
CNTNAP3B-203ENST00000377561 SOX6P35712 828 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 GRIK3Q13003 919 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 STARD3Q14849 445 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 NOMO2Q5JPE7 1267 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 FNBP1LQ5T0N5 605 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 OTUD3Q5T2D3 398 aaPredicted RBP18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 IL27RAQ6UWB1 636 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 ALYREFQ86V81 257 aaKnown RBP18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 TNS4Q8IZW8 715 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 FAM126AQ9BYI3 521 aaPredicted RBP18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 PRRG3Q9BZD7 231 aa18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 AJAP1Q9UKB5 411 aaPredicted RBP18.89■□□□□ 0.62
CNTNAP3B-203ENST00000377561 ACADMP11310 421 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 DGKAP23743 735 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 BOP1Q14137 746 aaKnown RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 BTG3Q14201 252 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 ADGRD1Q6QNK2 874 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 MIEF1Q9NQG6 463 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 WRAP73Q9P2S5 460 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 FAM47E-STBD1D6RA91 191 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 KRT36O76013 467 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SNRPB2P08579 225 aaKnown RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 UNGP13051 313 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 CRHR1P34998 444 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 CYP1B1Q16678 543 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 LACTB2Q53H82 288 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 HECTD3Q5T447 861 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 TRAF7Q6Q0C0 670 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 DAW1Q8N136 415 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 VMP1Q96GC9 406 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SEMA3CQ99985 751 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 NFKBIZQ9BYH8 718 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 EPS8L2Q9H6S3 715 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 GRHL1Q9NZI5 618 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 GPR25O00155 361 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 DRICH1Q6PGQ1 229 aaPredicted RBP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 LPCAT2Q7L5N7 544 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 EID3Q8N140 333 aa18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SF3B1O75533 1304 aaKnown RBP eCLIP18.89■□□□□ 0.61
CNTNAP3B-203ENST00000377561 MDM4O15151 490 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 MBTD1Q05BQ5 628 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 NCF4Q15080 339 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 AFTPHQ6ULP2 937 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 MTSS1LQ765P7 747 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 NDNQ99608 321 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 XPR1Q9UBH6 696 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 LIMD1Q9UGP4 676 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SLC1A5Q15758 541 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SLC26A9Q7LBE3 791 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 OMDQ99983 421 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 HMX1Q9NP08 348 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 PCDH8O95206 1070 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 CD52P31358 61 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 TMEM26Q6ZUK4 368 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 MRPL48Q96GC5 212 aaKnown RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 FAM192AQ9GZU8 254 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 ADCY6O43306 1168 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 TSPAN1O60635 241 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 USP2O75604 605 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 LYPLA1O75608 230 aaPredicted RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 SERPINA4P29622 427 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 CTBP1Q13363 440 aa18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 TRIM71Q2Q1W2 868 aaKnown RBP18.88■□□□□ 0.61
CNTNAP3B-203ENST00000377561 PABPC1LQ4VXU2 614 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms