RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GOLGA8TH3BQL2 631 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 TMEM189-UBE2V1I3L0A0 370 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 BUD23O43709 281 aaKnown RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 PFDN1O60925 122 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 LYPLA1O75608 230 aaPredicted RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 PGM3O95394 542 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 ENO1P06733 434 aaKnown RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 PABPC4LP0CB38 370 aaKnown RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 HTR7P34969 479 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 MLLT6P55198 1093 aaPredicted RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 PCLAFQ15004 111 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 DBN1Q16643 649 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 MON1AQ86VX9 555 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 C10orf107Q8IVU9 208 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 KLHDC8BQ8IXV7 354 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 FCRL5Q96RD9 977 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 CAB39LQ9H9S4 337 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 SRRDQ9UH36 339 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 SCML2Q9UQR0 700 aa14.18□□□□□ -0.14
MSH5-202ENST00000375740 HBS1LQ9Y450 684 aaKnown RBP14.18□□□□□ -0.14
MSH5-202ENST00000375740 MAGEA12P43365 314 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 SERPINB8P50452 374 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSH5-202ENST00000375740 SFT2D3Q587I9 215 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
MSH5-202ENST00000375740 PLD6Q8N2A8 252 aaKnown RBP14.17□□□□□ -0.14
MSH5-202ENST00000375740 IPMKQ8NFU5 416 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 GPR152Q8TDT2 470 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 HHIPL1Q96JK4 782 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 SERPINB11Q96P15 392 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 TBL1YQ9BQ87 522 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 THTPAQ9BU02 230 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 SLC7A8Q9UHI5 535 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 ANGPTL2Q9UKU9 493 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 AP3B1O00203 1094 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 SLC1A6P48664 564 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 RAP1GDS1P52306 607 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 MPP3Q13368 585 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 KRT72Q14CN4 511 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 NFE2Q16621 373 aaPredicted RBP14.17□□□□□ -0.14
MSH5-202ENST00000375740 LPCAT4Q643R3 524 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 MYLK4Q86YV6 388 aaPredicted RBP14.17□□□□□ -0.14
MSH5-202ENST00000375740 RTL3Q8N8U3 475 aaKnown RBP14.17□□□□□ -0.14
MSH5-202ENST00000375740 ACVR1CQ8NER5 493 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 ISL2Q96A47 359 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 C8orf48Q96LL4 319 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 KIFC1Q9BW19 673 aa14.17□□□□□ -0.14
MSH5-202ENST00000375740 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.142e-13■■■■■ 57.4
MSH5-202ENST00000375740 MOXD2PA6NHM9 499 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 ANXA9O76027 345 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 KDSRQ06136 332 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 CDK18Q07002 472 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 DLG2Q15700 870 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 PIK3R6Q5UE93 754 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 AFMIDQ63HM1 303 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 TTC9BQ8N6N2 239 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.14
MSH5-202ENST00000375740 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 CD99L2Q8TCZ2 262 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 PPP2R3CQ969Q6 453 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 FUBP3Q96I24 572 aaKnown RBP eCLIP14.16□□□□□ -0.14
MSH5-202ENST00000375740 FICDQ9BVA6 458 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 WWP1Q9H0M0 922 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 NDE1Q9NXR1 346 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 GMIPQ9P107 970 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 PPARGC1AQ9UBK2 798 aaKnown RBP14.16□□□□□ -0.14
MSH5-202ENST00000375740 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 NYNRINQ9P2P1 1898 aaKnown RBP14.16□□□□□ -0.14
MSH5-202ENST00000375740 A0A096LPK6 155 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 HLA-DQB2P05538 268 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 DLG1Q12959 904 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 CTXN3Q4LDR2 81 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 PCID2Q5JVF3 399 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 DENND5AQ6IQ26 1287 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 ATG14Q6ZNE5 492 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 SCUBE1Q8IWY4 988 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 ST13P4Q8IZP2 240 aaPredicted RBP14.16□□□□□ -0.14
MSH5-202ENST00000375740 PYDC1Q8WXC3 89 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 B3GALT6Q96L58 329 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 C1orf74Q96LT6 269 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 FBXO44Q9H4M3 255 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 DDX18Q9NVP1 670 aaKnown RBP14.16□□□□□ -0.14
MSH5-202ENST00000375740 DNAJC16Q9Y2G8 782 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 PCDHB5Q9Y5E4 795 aa14.16□□□□□ -0.14
MSH5-202ENST00000375740 A0A1W2PQ45 241 aaPredicted RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 A0A1W2PQY0 241 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 SERPINE1P05121 402 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 MPOP05164 745 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 CPA3P15088 417 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 DNAJB2P25686 324 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 CSE1LP55060 971 aaKnown RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 TBX4P57082 545 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 IRF9Q00978 393 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 MSLNQ13421 630 aaPredicted RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 POU6F1Q14863 301 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 FAM171A1Q5VUB5 890 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 PKN3Q6P5Z2 889 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 TNS4Q8IZW8 715 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms