RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PHKG1Q16816 387 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 BROXQ5VW32 411 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 DEFB128Q7Z7B8 93 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CARNMT1Q8N4J0 409 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 KAT5Q92993 513 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 TEKT5Q96M29 485 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 EPB41L4BQ9H329 900 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ARHGAP28Q9P2N2 729 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 STON1Q9Y6Q2 735 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 VCLP18206 1134 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 PBLDP30039 288 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 KCNJ2P63252 427 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 MZT2BQ6NZ67 158 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ISLR2Q6UXK2 745 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 REEP1Q9H902 201 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 NFICP08651 508 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CNPP09543 421 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ATP6V1C1P21283 382 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ACAT1P24752 427 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SPIRE1Q08AE8 756 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 MTA1Q13330 715 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 AUHQ13825 339 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 DPYSL3Q14195 570 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 NR1D2Q14995 579 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 MILR1Q7Z6M3 343 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC2A14Q8TDB8 520 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ELMO3Q96BJ8 720 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 PHACTR1Q9C0D0 580 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 RNF208Q9H0X6 261 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 RPL26L1Q9UNX3 145 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC12A8A0AV02 714 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 BCLAF3A2AJT9 711 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM88BA6NKF7 163 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 RECQL5O94762 991 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CCNA2P20248 432 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SCNN1BP51168 640 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 RENBPP51606 427 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC6A3Q01959 620 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 MAGEE2Q8TD90 523 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 UROC1Q96N76 676 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 INVSQ9Y283 1065 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CNTNAP2Q9UHC6 1331 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SMIM35A0A1B0GVV1 85 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SLC25A3Q00325 362 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ADIGQ0VDE8 80 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SH3D19Q5HYK7 790 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM63BQ5T3F8 832 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF513Q8N8E2 541 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 NARS2Q96I59 477 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CRNNQ9UBG3 495 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-202ENST00000374747 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 H3BMM5 538 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 M0R2N6 131 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 RGS14O43566 566 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 DYRK3O43781 588 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 KRT36O76013 467 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 MMP3P08254 477 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 MBL2P11226 248 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 MYL4P12829 197 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ANPEPP15144 967 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 GRM5P41594 1212 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 LPCAT1Q8NF37 534 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 STARD8Q92502 1023 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 GMLQ99445 158 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 SLITRK2Q9H156 845 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 PIH1D1Q9NWS0 290 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 CORO1CQ9ULV4 474 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 GSTK1Q9Y2Q3 226 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 PCDHB12Q9Y5F1 795 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 MAFBQ9Y5Q3 323 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 TPP1O14773 563 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 PGM3O95394 542 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 SHBGP04278 402 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ITGAXP20702 1163 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 YWHAQP27348 245 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 GRK4P32298 578 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ABRAXAS1Q6UWZ7 409 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 TTC7BQ86TV6 843 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 FKTNO75072 461 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ENTPD5O75356 428 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ENDOD1O94919 500 aa12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ZNF7P17097 686 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 WARSP23381 471 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-202ENST00000374747 ADSSP30520 456 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms