RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 TM6SF2Q9BZW4 377 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 IRF2BPLQ9H1B7 796 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 HAUS2Q9NVX0 235 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ZSCAN32Q9NX65 697 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 BCCIPQ9P287 314 aaKnown RBP eCLIP11.53□□□□□ -0.56
HSPG2-202ENST00000374676 IL36AQ9UHA7 158 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 SNX12Q9UMY4 172 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
HSPG2-202ENST00000374676 BCLAF3A2AJT9 711 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 C1QTNF3-AMACRE9PGA6 284 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 H7C0C1 242 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 MUSKO15146 869 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF217O75362 1048 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 LEFTY1O75610 366 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 IL1BP01584 269 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 IGLV3-19P01714 112 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 FGGP02679 453 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 DNTTP04053 509 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 CTSLP07711 333 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 RBP3P10745 1247 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 CR2P20023 1033 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 C5AR1P21730 350 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 SLC8A1P32418 973 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 CNR2P34972 360 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 MAPK8P45983 427 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 RGRP47804 291 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 ATP5OP48047 213 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 PXNP49023 591 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 EIF3EP60228 445 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 TCF15Q12870 199 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 MAP7D1Q3KQU3 841 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 USP39Q53GS9 565 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 TEX44Q53QW1 395 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 ATXN7L2Q5T6C5 722 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 HEATR6Q6AI08 1181 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 KIAA1324Q6UXG2 1013 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 USP30Q70CQ3 517 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 KBTBD6Q86V97 674 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 CDKL3Q8IVW4 592 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 PGBD5Q8N414 524 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 RYBPQ8N488 228 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 PRSS33Q8NF86 280 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 SLC35B2Q8TB61 432 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 HCAR2Q8TDS4 363 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 HTR3CQ8WXA8 447 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 VAT1Q99536 393 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 MGME1Q9BQP7 344 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 OSBPL1AQ9BXW6 950 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 SLC6A17Q9H1V8 727 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 PABPC3Q9H361 631 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 NT5MQ9NPB1 228 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 USP36Q9P275 1121 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 EVLQ9UI08 416 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 SARDHQ9UL12 918 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.57
HSPG2-202ENST00000374676 PCDHGA2Q9Y5H1 932 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 CEP192Q8TEP8 1941 aa11.52□□□□□ -0.57
HSPG2-202ENST00000374676 THADAQ6YHU6 1953 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 KCNK1O00180 336 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 MID1O15344 667 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 LILRB5O75023 590 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TUBB4AP04350 444 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ACADMP11310 421 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 PTPN3P26045 913 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 RBL1P28749 1068 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 OXTRP30559 389 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 P2RY2P41231 377 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 PSMD8P48556 350 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 SCNN1BP51168 640 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TPMTP51580 245 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 AP1S1P61966 158 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 CCDC15Q0P6D6 951 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 WASHC5Q12768 1159 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ZBTB17Q13105 803 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 SIX1Q15475 284 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 CCNG2Q16589 344 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TTC31Q49AM3 519 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ARSIQ5FYB1 569 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 DRICH1Q6PGQ1 229 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 NCEH1Q6PIU2 408 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 CNTD1Q8N815 330 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ACTRT1Q8TDG2 376 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 FAM131CQ96AQ9 280 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 EXOC2Q96KP1 924 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TEKT5Q96M29 485 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF641Q96N77 438 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TUBGCP5Q96RT8 1024 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 NAP1L3Q99457 506 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TPSD1Q9BZJ3 242 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms