RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PAPOLAP51003 745 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 CCNG1P51959 295 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 NRLP54845 237 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 DNAJB13P59910 316 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 ACVR1Q04771 509 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 BST1Q10588 318 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PRKAA1Q13131 559 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MSLNQ13421 630 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 MBTPS1Q14703 1052 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 POLD3Q15054 466 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 CHI3L2Q15782 390 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 INO80DQ53TQ3 878 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 FAM133BQ5BKY9 247 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 HECTD3Q5T447 861 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 N4BP2L1Q5TBK1 243 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 AGAP9Q5VTM2 703 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MBLAC2Q68D91 279 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MRNIPQ6NTE8 343 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 CNKSR3Q6P9H4 555 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PIWIL4Q7Z3Z4 852 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 SDCCAG8Q86SQ7 713 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 PACS2Q86VP3 889 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 ZC3HC1Q86WB0 502 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 RNF168Q8IYW5 571 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 C2CD4AQ8NCU7 369 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 ZNF461Q8TAF7 563 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 LINC01599Q8WXQ3 324 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 RMDN2Q96LZ7 410 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 MRPL57Q9BQC6 102 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 TMEM120AQ9BXJ8 343 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 ILKAPQ9H0C8 392 aaPredicted RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 EML4Q9HC35 981 aaKnown RBP8.83□□□□□ -1
SNRNP40-202ENST00000373720 SLCO1B3Q9NPD5 702 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PFDN4Q9NQP4 134 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 ANLNQ9NQW6 1124 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 SNX15Q9NRS6 342 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 TREX1Q9NSU2 369 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PCMTD2Q9NV79 361 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 TRPM5Q9NZQ8 1165 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 HEY2Q9UBP5 337 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 SEPT3Q9UH03 358 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 PCDHB12Q9Y5F1 795 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 NLRC5Q86WI3 1866 aa8.83□□□□□ -1
SNRNP40-202ENST00000373720 A0A096LPK6 155 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 A0A0G2JND7 137 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MROH6A6NGR9 719 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ACSL4O60488 711 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 NPHS1O60500 1241 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TLR5O60602 858 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 PRAMEF11O60813 436 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 NBNO60934 754 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TRPA1O75762 1119 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ABLIM3O94929 683 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MAP3K6O95382 1288 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 FGF19O95750 216 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 SOD2P04179 222 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ITGB1P05556 798 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 C2P06681 752 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 SERPINF2P08697 491 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 LAG3P18627 525 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 OGNP20774 298 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 BGNP21810 368 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 OR1E1P30953 314 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 PPARGP37231 505 aaPredicted RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 GRIA1P42261 906 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ALDH1A3P47895 512 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 RAB10P61026 200 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ABCE1P61221 599 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 RPL26P61254 145 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 SATB1Q01826 763 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TAF10Q12962 218 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MGAT5BQ3V5L5 792 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 PAN2Q504Q3 1202 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 HSP90AA5PQ58FG0 334 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 C10orf120Q5SQS8 335 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MPP7Q5T2T1 576 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 LIPMQ5VYY2 423 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 DENND5AQ6IQ26 1287 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 KIAA1841Q6NSI8 718 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 NEPROQ6NW34 567 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 KDELC1Q6UW63 502 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TBC1D1Q86TI0 1168 aaPredicted RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 MTDHQ86UE4 582 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 UNC5BQ8IZJ1 945 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 DCLK2Q8N568 766 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TAB3Q8N5C8 712 aaPredicted RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 KIAA1958Q8N8K9 716 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 TTC8Q8TAM2 541 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 BRSK1Q8TDC3 778 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 CNDP1Q96KN2 507 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 ZFRQ96KR1 1074 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 PSKH2Q96QS6 385 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 GORASP1Q9BQQ3 440 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 UNC93B1Q9H1C4 597 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MRPL46Q9H2W6 279 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 MFSD1Q9H3U5 465 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 DCLRE1BQ9H816 532 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 KCNK13Q9HB14 408 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 NMUR1Q9HB89 426 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 MRPL40Q9NQ50 206 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms