RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 CNDP1Q96KN2 507 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 ACAP3Q96P50 834 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 TTC1Q99614 292 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 VN1R3Q9BXE9 311 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 KLC2Q9H0B6 622 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 PTPRHQ9HD43 1115 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 C8orf4Q9NR00 106 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 TUBA8Q9NY65 449 aaPredicted RBP13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 WASF3Q9UPY6 502 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
CHCHD1-202ENST00000372837 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 TMEM114B3SHH9 223 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 F8VP50 259 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ALDH1A2O94788 518 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 CST3P01034 146 aaPredicted RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ERBB2P04626 1255 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ZCCHC18P0CG32 403 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 THRAP10827 490 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 KRT10P13645 584 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 CD19P15391 556 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 MAGEA3P43357 314 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RANBP1P43487 201 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 EIF3EP60228 445 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 HPCAP84074 193 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 MTAPQ13126 283 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 TUBB3Q13509 450 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 DPYSQ14117 519 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RFTN1Q14699 578 aaPredicted RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 CHI3L2Q15782 390 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 MSS51Q4VC12 460 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 STEAP4Q687X5 459 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ANKMY2Q8IV38 441 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 TERB1Q8NA31 727 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 GSDMBQ8TAX9 411 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RIN3Q8TB24 985 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 MCRS1Q96EZ8 462 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RILPQ96NA2 401 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 PLEKHG4BQ96PX9 1271 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 TBCBQ99426 244 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 WDR83Q9BRX9 315 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 XYLT2Q9H1B5 865 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 MRM3Q9HC36 420 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 RXFP3Q9NSD7 469 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 DNAAF2Q9NVR5 837 aaKnown RBP13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 ADAM28Q9UKQ2 775 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 PPM1HQ9ULR3 514 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 DTNAQ9Y4J8 743 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 TTLL3Q9Y4R7 772 aa13.08□□□□□ -0.32
CHCHD1-202ENST00000372837 COL1A2P08123 1366 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 C15orf38-AP3S2A0A0A6YYH1 394 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 FOXD2O60548 495 aaPredicted RBP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 TMEM63AO94886 807 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 C8BP07358 591 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 RBP3P10745 1247 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ZFXP17010 805 aaPredicted RBP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 TTKP33981 857 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 TNFSF9P41273 254 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 RPS9P46781 194 aaKnown RBP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 PSMD7P51665 324 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 HDAC4P56524 1084 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 OGDHQ02218 1023 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 FOLH1Q04609 750 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 MSLNQ13421 630 aaPredicted RBP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 FZD5Q13467 585 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 APOFQ13790 326 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 CCNIQ14094 377 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 KRT81Q14533 505 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 CCDC153Q494R4 210 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 BOLA3Q53S33 107 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 C2CD6Q53TS8 623 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ARPINQ7Z6K5 226 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 CDKL2Q92772 493 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 FGF14Q92915 247 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ISL2Q96A47 359 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 MAN1C1Q9NR34 630 aa13.07□□□□□ -0.32
CHCHD1-202ENST00000372837 PTBP2Q9UKA9 531 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms