RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 S100GP29377 79 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PKNOX1P55347 436 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 GPAT3Q53EU6 434 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 TXNDC11Q6PKC3 985 aa11.65□□□□□ -0.54
VCL-202ENST00000372755 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.54
VCL-202ENST00000372755 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.55
VCL-202ENST00000372755 OR10H2O60403 315 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 GCATO75600 419 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 SLC25A12O75746 678 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 CBX6O95503 412 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 ADSSP30520 456 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 CD86P42081 329 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.55
VCL-202ENST00000372755 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.55
VCL-202ENST00000372755 RGS1Q08116 209 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 PCDH20Q8N6Y1 951 aaKnown RBP11.65□□□□□ -0.55
VCL-202ENST00000372755 AMER2Q8N7J2 671 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 EIF1ADQ8N9N8 165 aaKnown RBP11.65□□□□□ -0.55
VCL-202ENST00000372755 MFSD1Q9H3U5 465 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 PTGFRNQ9P2B2 879 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 IKZF3Q9UKT9 509 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 GMPPBQ9Y5P6 360 aa11.65□□□□□ -0.55
VCL-202ENST00000372755 PSMB4P28070 264 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RPL4P36578 427 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 PPATQ06203 517 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 NOL9Q5SY16 702 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 RERGQ96A58 199 aaPredicted RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 IGFLR1Q9H665 355 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 SLC12A4Q9UP95 1085 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 LOC100506127A0A0U1RQW1 187 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 TNFRSF21O75509 655 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 SHMT1P34896 483 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 GPR1P46091 355 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 BNIP2Q12982 314 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 LRRC38Q5VT99 294 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 CYP4X1Q8N118 509 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 C3orf18Q9UK00 162 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 FAM86B1E9PN63 330 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 FAM86B2P0C5J1 330 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 UGT2B15P54855 530 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 USP46P62068 366 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 PEX6Q13608 980 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 DGCR6Q14129 220 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RAET1GQ6H3X3 334 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 TSHZ1Q6ZSZ6 1077 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 OR7A2PQ8NGA2 310 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 OR52K1Q8NGK4 314 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 PIWIL2Q8TC59 973 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 MORF4L1Q9UBU8 362 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 CCT3P49368 545 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 CHN2P52757 468 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 PFKPQ01813 784 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 HSPA14Q0VDF9 509 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 MAPKAPK3Q16644 382 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 FBXO42Q6P3S6 717 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 B3GNT6Q6ZMB0 384 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 ERGIC3Q9Y282 383 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 USP12O75317 370 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 ULK1O75385 1050 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 CHKAP35790 457 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
VCL-202ENST00000372755 LPIN1Q14693 890 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.552e-14■■■□□ 15.9
VCL-202ENST00000372755 GRIN3AQ8TCU5 1115 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 TRAPPC12Q8WVT3 735 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 KAT5Q92993 513 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 CD101Q93033 1021 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 ADAM2Q99965 735 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 SPAG4Q9NPE6 437 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■□□□□ 8.6
VCL-202ENST00000372755 GGA2Q9UJY4 613 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 ACTL7BQ9Y614 415 aa11.64□□□□□ -0.55
VCL-202ENST00000372755 RECQL4O94761 1208 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 NR2F1P10589 423 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 MYL9P24844 172 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ZNF143P52747 638 aaPredicted RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 CXCL9Q07325 125 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CES5AQ6NT32 575 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ABRAXAS1Q6UWZ7 409 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 CXXC5Q7LFL8 322 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 AHI1Q8N157 1196 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 KLHL23Q8NBE8 558 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 HSFY1Q96LI6 401 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 ZYG11BQ9C0D3 744 aa11.63□□□□□ -0.55
VCL-202ENST00000372755 TRUB2O95900 331 aaKnown RBP11.63□□□□□ -0.55
VCL-202ENST00000372755 NPR3P17342 541 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms