RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 GRIK3Q13003 919 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 PRKG2Q13237 762 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ALFQ53S48 1182 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 DGKKQ5KSL6 1271 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 INTS11Q5TA45 600 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 RIOX2Q8IUF8 465 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 RASGEF1CQ8N431 466 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 SFRP1Q8N474 314 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 OLFM1Q99784 485 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MRPL57Q9BQC6 102 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 C3orf18Q9UK00 162 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 EFR3BQ9Y2G0 817 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MTF2Q9Y483 593 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TRPV2Q9Y5S1 764 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TMEM191CA6NGB0 347 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 WNT7AO00755 349 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ZMPSTE24O75844 475 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 LYPLA2O95372 231 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ANPEPP15144 967 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 GSTT1P30711 240 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 PPIL2Q13356 520 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 PDK3Q15120 406 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TSNQ15631 228 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ARSHQ5FYA8 562 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 CELF3Q5SZQ8 465 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MARK2Q7KZI7 788 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 CROCCP3Q8IVE0 287 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 FBXO30Q8TB52 745 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TNFRSF25Q93038 417 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 C19orf60Q96EN9 201 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 C2orf49Q9BVC5 232 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 DGCR6LQ9BY27 220 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 RAD21L1Q9H4I0 556 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 SERHLQ9NQF3 203 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ATAD3AQ9NVI7 634 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 DPP7Q9UHL4 492 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 CHKBQ9Y259 395 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ROBO3Q96MS0 1386 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MMP8P22894 467 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 MAPKAPK3Q16644 382 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 AAGABQ6PD74 315 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 RINLQ6ZS11 566 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 ZNF438Q7Z4V0 828 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 AADATQ8N5Z0 425 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 NACC2Q96BF6 587 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 REXO4Q9GZR2 422 aaKnown RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 FBXO6Q9NRD1 293 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TMEM216Q9P0N5 145 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 PACSIN3Q9UKS6 424 aa11.55□□□□□ -0.56
PTPRF-203ENST00000372407 TBKBP1A7MCY6 615 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ASNA1O43681 348 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MLYCDO95822 493 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 FGFR3P22607 806 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 SERPINA4P29622 427 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 GRK4P32298 578 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 GABRB2P47870 512 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 RAB10P61026 200 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 DGCR6Q14129 220 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 KCTD21Q4G0X4 260 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MFSD5Q6N075 450 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 VN1R5Q7Z5H4 357 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 SLC41A1Q8IVJ1 513 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 PROX1Q92786 737 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MFSD14AQ96MC6 490 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 NUAK2Q9H093 628 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MAN1C1Q9NR34 630 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 PRPF19Q9UMS4 504 aaKnown RBP11.54□□□□□ -0.56
PTPRF-203ENST00000372407 IPPQ9Y573 584 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 NRCAMQ92823 1304 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ALS2Q96Q42 1657 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 YDJCA8MPS7 323 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 BANF1O75531 89 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MFN2O95140 757 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 BMP10O95393 424 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 PGM3O95394 542 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ALOX12P18054 663 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 NOS3P29474 1203 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
PTPRF-203ENST00000372407 TNK2Q07912 1038 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ISLR2Q6UXK2 745 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 RDH11Q8TC12 318 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 KCTD4Q8WVF5 259 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 LGMNQ99538 433 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ADAM2Q99965 735 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 MRPL9Q9BYD2 267 aaKnown RBP11.54□□□□□ -0.56
PTPRF-203ENST00000372407 SENP6Q9GZR1 1112 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-203ENST00000372407 ZSCAN32Q9NX65 697 aa11.54□□□□□ -0.56
PTPRF-203ENST00000372407 FZD1Q9UP38 647 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms