RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 IL12RB2Q99665 862 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 TPSD1Q9BZJ3 242 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 SARDHQ9UL12 918 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 TTC7AQ9ULT0 858 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 LIASO43766 372 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 PAPSS2O95340 614 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 IL1BP01584 269 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 PTPN3P26045 913 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CHRNA3P32297 505 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 MYLK3Q32MK0 819 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 ARSIQ5FYB1 569 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 KIAA1324Q6UXG2 1013 aaKnown RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CDKL3Q8IVW4 592 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-203ENST00000372242 BBS5Q8N3I7 341 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 CAMKK1Q8N5S9 505 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 VOPP1Q96AW1 172 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 HEPHQ9BQS7 1158 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 TMEM121Q9BTD3 319 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 IL36AQ9UHA7 158 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 WASF2Q9Y6W5 498 aa16.56■□□□□ 0.24
TMEM53-203ENST00000372242 KCNN4O15554 427 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 ZBTB24O43167 697 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-203ENST00000372242 LEFTY1O75610 366 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 ALDH1A2O94788 518 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 POP4O95707 220 aaKnown RBP16.55■□□□□ 0.24
TMEM53-203ENST00000372242 PSMD8P48556 350 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 RPS14P62263 151 aaKnown RBP16.55■□□□□ 0.24
TMEM53-203ENST00000372242 BYSLQ13895 437 aaKnown RBP16.55■□□□□ 0.24
TMEM53-203ENST00000372242 CREG2Q8IUH2 290 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 PLPP6Q8IY26 295 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 MAIP1Q8WWC4 291 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 PRCCQ92733 491 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-203ENST00000372242 SIPA1Q96FS4 1042 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 NSMCE3Q96MG7 304 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 MGME1Q9BQP7 344 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 USP29Q9HBJ7 922 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 CD93Q9NPY3 652 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 PPM1HQ9ULR3 514 aa16.55■□□□□ 0.24
TMEM53-203ENST00000372242 BCLAF3A2AJT9 711 aaKnown RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 MTSS1O43312 755 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 RNASEH1O60930 286 aaKnown RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 TDGF1P13385 188 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 DSC2Q02487 901 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 NSUN2Q08J23 767 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ANGPT1Q15389 498 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 OASLQ15646 514 aaKnown RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 CST6Q15828 149 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 CCNG2Q16589 344 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 TEX44Q53QW1 395 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF776Q68DI1 518 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 SRLQ86TD4 932 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 RASSF3Q86WH2 238 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 FAM71DQ8N9W8 422 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 PIP4K2CQ8TBX8 421 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 NAP1L3Q99457 506 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 NOD2Q9HC29 1040 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 EBF1Q9UH73 591 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ATP8A1Q9Y2Q0 1164 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF318Q5VUA4 2279 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 PLK4O00444 970 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ALOX15BO15296 676 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 MID1O15344 667 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 CR2P20023 1033 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 SLC8A1P32418 973 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 HSPA9P38646 679 aaKnown RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 FNTBP49356 437 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 GDF10P55107 478 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 DSG4Q86SJ6 1040 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF567Q8N184 647 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 NKD2Q969F2 451 aaPredicted RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 SEMA3CQ99985 751 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 POLR1EQ9GZS1 481 aaKnown RBP16.54■□□□□ 0.24
TMEM53-203ENST00000372242 FBRSQ9HAH7 460 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 ZNF148Q9UQR1 794 aa16.54■□□□□ 0.24
TMEM53-203ENST00000372242 F5H423 210 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 PDE2AO00408 941 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 KPNA3O00505 521 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 GALR2O43603 387 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 PIGNO95427 931 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 PRNPP04156 253 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 UGT2B4P06133 528 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 KCNJ1P48048 391 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 NIPAL4Q0D2K0 466 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 IHHQ14623 411 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 PID1Q7Z2X4 250 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 CAMK1DQ8IU85 385 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 RLN3Q8WXF3 142 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 TEKT5Q96M29 485 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 FRMD8P1Q9BZ68 369 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 KLHL8Q9P2G9 620 aaPredicted RBP16.53■□□□□ 0.24
TMEM53-203ENST00000372242 SERGEFQ9UGK8 458 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 AMACRQ9UHK6 382 aa16.53■□□□□ 0.24
TMEM53-203ENST00000372242 FBXO4Q9UKT5 387 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms