RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SERPINF2P08697 491 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 TPH1P17752 444 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SKOR1P84550 965 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SLC12A1Q13621 1099 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SLC14A2Q15849 920 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 ARMC3Q5W041 872 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 POTEHQ6S545 545 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 TMEM135Q86UB9 458 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 ZNF557Q8N988 423 aaPredicted RBP26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SLC44A1Q8WWI5 657 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 NSUN3Q9H649 340 aaKnown RBP26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 LAMA3Q16787 3333 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SNAP91O60641 907 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 USP1O94782 785 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 C1QAP02745 245 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 INHBAP08476 426 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 CYTH1Q15438 398 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 RARS2Q5T160 578 aaKnown RBP26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 RETSATQ6NUM9 610 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 ZNF449Q6P9G9 518 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 CTAGE3PQ8IX95 158 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 TNS4Q8IZW8 715 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 CYP4X1Q8N118 509 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 IRF7Q92985 503 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 VPS51Q9UID3 782 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 SOX13Q9UN79 622 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 ACTL7AQ9Y615 435 aa26.65■■□□□ 1.86
ATPAF1-202ENST00000371937 FAM159BA6NKW6 160 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 FRG1Q14331 258 aaKnown RBP26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 PCID2Q5JVF3 399 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 EXOC3L1Q86VI1 746 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 SLC26A11Q86WA9 606 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 TMEM25Q86YD3 366 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 PTCD2Q8WV60 388 aaKnown RBP26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 CDKL2Q92772 493 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 SPHK2Q9NRA0 654 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 ACTL7BQ9Y614 415 aa26.64■■□□□ 1.85
ATPAF1-202ENST00000371937 PENKP01210 267 aaPredicted RBP26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 FSHRP23945 695 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 PLK1P53350 603 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 LMAN2Q12907 356 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 TRMT10BQ6PF06 316 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 KDELC2Q7Z4H8 507 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 GPR149Q86SP6 731 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 PPM1NQ8N819 430 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 DCAKDQ8WVC6 231 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 KIFC1Q9BW19 673 aa26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 CNOT10Q9H9A5 744 aaKnown RBP26.63■■□□□ 1.85
ATPAF1-202ENST00000371937 TTC24A2A3L6 582 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 PIAS1O75925 651 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 TMCC1O94876 653 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 EPOP01588 193 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 ANKRD20A4Q4UJ75 823 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 LINGO4Q6UY18 593 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 EFHBQ8N7U6 833 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 IFT43Q96FT9 208 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 BBS2Q9BXC9 721 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 PPANQ9NQ55 473 aaKnown RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 SENP1Q9P0U3 644 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 FAM169AQ9Y6X4 670 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 CXorf51AA0A1B0GTR3 108 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 LOC285095A0A1B0GVY8 99 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 A6NNZ2 444 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 CD160O95971 181 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 KRT15P19012 456 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 ATP1A2P50993 1020 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 GABPB1Q06547 395 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 NSUN2Q08J23 767 aaKnown RBP eCLIP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 SLC1A5Q15758 541 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 TUBB8Q3ZCM7 444 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 METTL3Q86U44 580 aaKnown RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 ADGRG2Q8IZP9 1017 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 APCDD1Q8J025 514 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 PPHLN1Q8NEY8 458 aaKnown RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 ZNF669Q96BR6 464 aaPredicted RBP26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 FEM1CQ96JP0 617 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 LINC00597Q9H2U6 94 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 SCUBE2Q9NQ36 999 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 CHRAC1Q9NRG0 131 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 ZNF180Q9UJW8 692 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 CLEC4EQ9ULY5 219 aa26.62■■□□□ 1.85
ATPAF1-202ENST00000371937 IQANK1A0A1B0GTG1 560 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 NEDD8-MDP1E9PL57 170 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 INSIG1O15503 277 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 CR2P20023 1033 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 SCNN1BP51168 640 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 HYAL1Q12794 435 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 NAB1Q13506 487 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 IHHQ14623 411 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 PLEKHG6Q3KR16 790 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 PKN3Q6P5Z2 889 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 NPAS3Q8IXF0 933 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 SLC25A41Q8N5S1 370 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 NUDCD1Q96RS6 583 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 NOD2Q9HC29 1040 aa26.61■■□□□ 1.85
ATPAF1-202ENST00000371937 GLP2RO95838 553 aa26.6■■□□□ 1.85
ATPAF1-202ENST00000371937 CD70P32970 193 aa26.6■■□□□ 1.85
ATPAF1-202ENST00000371937 SERPINH1P50454 418 aaKnown RBP26.6■■□□□ 1.85
ATPAF1-202ENST00000371937 CDK18Q07002 472 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms