RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 NR2E1Q9Y466 385 aa11.98□□□□□ -0.49
DEPDC1-201ENST00000370966 DYTNA2CJ06 578 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 RECQL5O94762 991 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CYP3A5P20815 502 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PPP2R1BP30154 601 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PSME3P61289 254 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ACSM2AQ08AH3 577 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 SMARCB1Q12824 385 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ACSM2BQ68CK6 577 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 LPCAT2Q7L5N7 544 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PHF21AQ96BD5 680 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PTCD3Q96EY7 689 aaKnown RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 SEMA4BQ9NPR2 832 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ARL15Q9NXU5 204 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ANAPC2Q9UJX6 822 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 STXBP5LQ9Y2K9 1186 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 VWA7Q9Y334 891 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 MTF2Q9Y483 593 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 C5orf60A6NFR6 353 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 WFS1O76024 890 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ALDH1A2O94788 518 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PIGRP01833 764 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PBLDP30039 288 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CD52P31358 61 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 KRR1Q13601 381 aaKnown RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CRY1Q16526 586 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PTPRNQ16849 979 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CLNKQ7Z7G1 428 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ADAMTSL2Q86TH1 951 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 AADATQ8N5Z0 425 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 ABHD8Q96I13 439 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 APOBEC3GQ9HC16 384 aaKnown RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 GRHL1Q9NZI5 618 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PAIP2BQ9ULR5 123 aaKnown RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 TMEM26Q6ZUK4 368 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 SPPL2BQ8TCT7 592 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 LPPQ93052 612 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 C7orf26Q96N11 449 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CEP44Q9C0F1 390 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 FZD8Q9H461 694 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 SPAG4Q9NPE6 437 aa11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 LEF1Q9UJU2 399 aaPredicted RBP11.97□□□□□ -0.49
DEPDC1-201ENST00000370966 CNTNAP1P78357 1384 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TRIM38O00635 465 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 MAP3K13O43283 966 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TSPAN1O60635 241 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 ANXA6P08133 673 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 LPOP22079 712 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 PTPN3P26045 913 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 KLRC2P26717 231 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 PIK3R1P27986 724 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TTKP33981 857 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 IL5RAQ01344 420 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 CTBP1Q13363 440 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 GSTA3Q16772 222 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 FAM187BQ17R55 369 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 DHDDSQ86SQ9 333 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 C10orf107Q8IVU9 208 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 CLYBLQ8N0X4 340 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 RSPH1Q8WYR4 309 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 QKIQ96PU8 341 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■□□□□ 9.1
DEPDC1-201ENST00000370966 ASB8Q9H765 288 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 FETUBQ9UGM5 382 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 SNED1Q8TER0 1413 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 CD3EAPO15446 510 aaKnown RBP11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 AMHP03971 560 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 POLD2P49005 469 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 SNRPD1P62314 119 aaKnown RBP11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 MBTD1Q05BQ5 628 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 IKBKEQ14164 716 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC1A5Q15758 541 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 SLC35G1Q2M3R5 365 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 METTL21CQ5VZV1 264 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 PMF1Q6P1K2 205 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TXNDC11Q6PKC3 985 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 ANKS1BQ7Z6G8 1248 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 IRGQQ8WZA9 623 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 FBXL18Q96ME1 805 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 SDCBP2Q9H190 292 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 TMEM245Q9H330 911 aa11.96□□□□□ -0.49
DEPDC1-201ENST00000370966 OCM2P0CE71 109 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 OCMP0CE72 109 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 BNIP1Q12981 228 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 TRMT11Q7Z4G4 463 aaKnown RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KIAA2013Q8IYS2 634 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 SPPL2AQ8TCT8 520 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms