RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SLC8B1Q6J4K2 584 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ZNF280DQ6N043 979 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TRNP1Q6NT89 227 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PPP1R2P3Q6NXS1 205 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 OLFML1Q6UWY5 402 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CCDC149Q6ZUS6 474 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 FAM183BPQ6ZVS7 135 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ZNF354CQ86Y25 554 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RHOT2Q8IXI1 618 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 DCP1BQ8IZD4 617 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 TXLNBQ8N3L3 684 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 NAT16Q8N8M0 369 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TMEM52Q8NDY8 209 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 FEZF2Q8TBJ5 459 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ZNF564Q8TBZ8 553 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SPPL3Q8TCT6 385 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 FCRL2Q96LA5 508 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 HSFY1Q96LI6 401 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PGLYRP2Q96PD5 576 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 C17orf80Q9BSJ5 609 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TLR10Q9BXR5 811 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 DNAI2Q9GZS0 605 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MIS12Q9H081 205 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RAB6CQ9H0N0 254 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ALG13Q9NP73 1137 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 PARVAQ9NVD7 372 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 UVRAGQ9P2Y5 699 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CEP83Q9Y592 693 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ALG6Q9Y672 507 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CDY1Q9Y6F8 540 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 WDR27A2RRH5 827 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MTMR11A4FU01 709 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 FADS2P1A8MWK0 482 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 F8VP50 259 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 AURKAO14965 403 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 GRAP2O75791 330 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ZNF205O95201 554 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SEC24AO95486 1093 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 HAPLN1P10915 354 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 KRT3P12035 628 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 OSMP13725 252 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PRKCAP17252 672 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 COMTP21964 271 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CASQ1P31415 396 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CTNNB1P35222 781 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PPM1AP35813 382 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MAGEA11P43364 429 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 KIR2DL1P43626 348 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 KIR2DL2P43627 348 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 PGFP49763 221 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TKTL1P51854 596 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RNASE9P60153 205 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SRSF2Q01130 221 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SLC6A3Q01959 620 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ROR1Q01973 937 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SEMA5AQ13591 1074 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CAMK1Q14012 370 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MESDQ14696 234 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TESK1Q15569 626 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CFAP221Q4G0U5 840 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 HSF5Q4G112 596 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 RAB41Q5JT25 222 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 DAB2IPQ5VWQ8 1189 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 DNAJC24Q6P3W2 148 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 C4orf50Q6ZRC1 276 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 BHLHA9Q7RTU4 235 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 NT5DC3Q86UY8 548 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PTRH1Q86Y79 214 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SPATA2LQ8IUW3 424 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 ARFGAP1Q8N6T3 406 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 EMC1Q8N766 993 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 C3orf20Q8ND61 904 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 STKLD1Q8NE28 680 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 TRIM58Q8NG06 486 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SCAMP5Q8TAC9 235 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SMARCD1Q96GM5 515 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 CCDC138Q96M89 665 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SLC12A9Q9BXP2 914 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 ZBP1Q9H171 429 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 MTIF3Q9H2K0 278 aaKnown RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 SYNCQ9H7C4 482 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 RXFP1Q9HBX9 757 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 SMURF1Q9HCE7 757 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 PACSIN2Q9UNF0 486 aaPredicted RBP3.69□□□□□ -1.82
MCF2-202ENST00000370573 PLXNA4Q9HCM2 1894 aa3.69□□□□□ -1.82
MCF2-202ENST00000370573 C5orf67F2Z3F1 127 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 KIF2AO00139 706 aaPredicted RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 GRM6O15303 877 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TEX28O15482 410 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 SRGAP2O75044 1071 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 PROSCO94903 275 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CXCL14O95715 111 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TUBB4AP04350 444 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 FYNP06241 537 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 GSNP06396 782 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CA3P07451 260 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 CNPP09543 421 aaKnown RBP3.68□□□□□ -1.82
MCF2-202ENST00000370573 CTSAP10619 480 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 TCF4P15884 667 aa3.68□□□□□ -1.82
MCF2-202ENST00000370573 NAT1P18440 290 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms