RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NOVA1P51513 510 aaKnown RBP20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 CYTH1Q15438 398 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 TEAD4Q15561 434 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 ZNF423Q2M1K9 1284 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 NPWQ8N729 165 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 DEFB124Q8NES8 71 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 FAM71BQ8TC56 605 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 GRIN3AQ8TCU5 1115 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 TEKT4Q8WW24 435 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 TSC1Q92574 1164 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 CHP1Q99653 195 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 TM6SF2Q9BZW4 377 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 SLC39A8Q9C0K1 460 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 GAREM1Q9H706 876 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 ABHD10Q9NUJ1 306 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 IP6K2Q9UHH9 426 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 MFHAS1Q9Y4C4 1052 aa20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 ARID1BQ8NFD5 2236 aaPredicted RBP20.88■□□□□ 0.93
SMNDC1-201ENST00000369592 BUB1O43683 1085 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 PRAMEF11O60813 436 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 CBFA2T3O75081 653 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 CER1O95813 267 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 RARAP10276 462 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 GKP32189 559 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 MYLK3Q32MK0 819 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 POLNQ7Z5Q5 900 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 PACSIN1Q9BY11 444 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 LHX3Q9UBR4 397 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 ANAPC7Q9UJX3 599 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 WASF3Q9UPY6 502 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 DMTF1Q9Y222 760 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 PCDHGB2Q9Y5G2 931 aa20.87■□□□□ 0.93
SMNDC1-201ENST00000369592 J3KR12 359 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 AP1G1O43747 822 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 POP4O95707 220 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 DNA2P51530 1060 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 ARSEP51690 589 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 SNRPD1P62314 119 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 CCDC15Q0P6D6 951 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 ZNF284Q2VY69 593 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 TMEM259Q4ZIN3 620 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 NAPEPLDQ6IQ20 393 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 PARS2Q7L3T8 475 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 PRPF39Q86UA1 669 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 TMEM145Q8NBT3 493 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 PPP1R16AQ96I34 528 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 CELF6Q96J87 481 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 ZFR2Q9UPR6 939 aaKnown RBP20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 FADS3Q9Y5Q0 445 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 CEP295Q9C0D2 2601 aa20.86■□□□□ 0.93
SMNDC1-201ENST00000369592 SPINT1O43278 529 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 RNGTTO60942 597 aaKnown RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 ADRB3P13945 408 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 HOXB3P14651 431 aaPredicted RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 IL4RP24394 825 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 CD38P28907 300 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 PAPOLAP51003 745 aaKnown RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 NEK3P51956 506 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 ADKP55263 362 aaKnown RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 ZNF805Q5CZA5 627 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 PPP6R3Q5H9R7 873 aaPredicted RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 ATXN7L2Q5T6C5 722 aaPredicted RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 HORMAD1Q86X24 394 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 CPNE8Q86YQ8 564 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 TP53INP2Q8IXH6 220 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 MFSD2AQ8NA29 543 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 OR6K2Q8NGY2 324 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 SERAC1Q96JX3 654 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 CPEB1Q9BZB8 566 aaKnown RBP20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 ZDHHC6Q9H6R6 413 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 TM7SF3Q9NS93 570 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 UVRAGQ9P2Y5 699 aa20.85■□□□□ 0.93
SMNDC1-201ENST00000369592 A0A1W2PQU0 124 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 H0Y8X5 98 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 MYO1FO00160 1098 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 SH3BP5O60239 455 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 TMEM253P0C7T8 217 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 MAT2AP31153 395 aaKnown RBP20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 FAM193AP78312 1265 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 SHBQ15464 509 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 SMTNL2Q2TAL5 461 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 IQCHQ86VS3 1027 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 LZTR1Q8N653 840 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 NETO2Q8NC67 525 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 BAHD1Q8TBE0 780 aaPredicted RBP20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 ZNF564Q8TBZ8 553 aaPredicted RBP20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 GDAP1L1Q96MZ0 367 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 CSPG4P5Q96PW8 444 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 OSBPL1AQ9BXW6 950 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 PCDH18Q9HCL0 1135 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 DYRK4Q9NR20 520 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 ETNK2Q9NVF9 386 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 ANKRD36A6QL64 1941 aa20.84■□□□□ 0.93
SMNDC1-201ENST00000369592 ARHGAP42A6NI28 874 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 C16orf96A6NNT2 1141 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 AREL1O15033 823 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 PCDHGA12O60330 932 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 PROSCO94903 275 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 H2AFZP0C0S5 128 aa20.83■□□□□ 0.93
SMNDC1-201ENST00000369592 ABL2P42684 1182 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms